Experiment: Anaero. lactate (C), perchlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2867 and Dsui_2868 are separated by 46 nucleotides Dsui_2868 and Dsui_2869 overlap by 17 nucleotides
Dsui_2867: Dsui_2867 - surface antigen family protein, at 3,061,146 to 3,061,844
_2867
Dsui_2868: Dsui_2868 - tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain protein, at 3,061,891 to 3,063,858
_2868
Dsui_2869: Dsui_2869 - transcriptional regulator, at 3,063,842 to 3,064,813
_2869
Position (kb)
3061
3062
3063
3064 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3060.891 kb on - strand at 3061.082 kb on + strand at 3061.136 kb on + strand at 3061.424 kb on + strand, within Dsui_2867 at 3061.424 kb on + strand, within Dsui_2867 at 3061.472 kb on + strand, within Dsui_2867 at 3061.555 kb on - strand at 3061.750 kb on + strand, within Dsui_2867 at 3061.755 kb on + strand at 3061.805 kb on + strand at 3061.888 kb on + strand at 3061.938 kb on + strand at 3062.018 kb on + strand at 3062.256 kb on + strand, within Dsui_2868 at 3062.366 kb on + strand, within Dsui_2868 at 3062.389 kb on + strand, within Dsui_2868 at 3062.730 kb on - strand, within Dsui_2868 at 3062.839 kb on - strand at 3062.893 kb on + strand at 3062.956 kb on + strand, within Dsui_2868 at 3063.078 kb on - strand, within Dsui_2868 at 3063.130 kb on - strand at 3063.243 kb on + strand, within Dsui_2868 at 3063.313 kb on + strand at 3063.545 kb on + strand, within Dsui_2868 at 3063.569 kb on + strand, within Dsui_2868 at 3063.668 kb on + strand at 3063.668 kb on + strand at 3063.736 kb on + strand at 3063.794 kb on + strand at 3063.794 kb on + strand at 3063.825 kb on + strand at 3063.833 kb on - strand at 3063.946 kb on - strand, within Dsui_2869 at 3063.947 kb on - strand, within Dsui_2869 at 3064.002 kb on + strand, within Dsui_2869 at 3064.194 kb on - strand, within Dsui_2869 at 3064.356 kb on + strand, within Dsui_2869 at 3064.465 kb on + strand, within Dsui_2869 at 3064.545 kb on - strand, within Dsui_2869 at 3064.632 kb on - strand, within Dsui_2869 at 3064.633 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor remove 3,060,891 - +0.3 3,061,082 + -0.1 3,061,136 + +0.9 3,061,424 + Dsui_2867 0.40 -0.1 3,061,424 + Dsui_2867 0.40 -2.6 3,061,472 + Dsui_2867 0.47 +0.9 3,061,555 - +0.9 3,061,750 + Dsui_2867 0.86 -1.2 3,061,755 + +0.3 3,061,805 + -0.9 3,061,888 + +0.3 3,061,938 + +0.0 3,062,018 + -0.7 3,062,256 + Dsui_2868 0.19 -1.1 3,062,366 + Dsui_2868 0.24 -2.1 3,062,389 + Dsui_2868 0.25 +0.0 3,062,730 - Dsui_2868 0.43 +1.1 3,062,839 - +0.9 3,062,893 + +0.9 3,062,956 + Dsui_2868 0.54 +0.1 3,063,078 - Dsui_2868 0.60 +1.1 3,063,130 - +0.6 3,063,243 + Dsui_2868 0.69 +2.3 3,063,313 + +1.9 3,063,545 + Dsui_2868 0.84 +0.9 3,063,569 + Dsui_2868 0.85 +1.0 3,063,668 + +0.3 3,063,668 + +1.1 3,063,736 + +2.9 3,063,794 + +0.3 3,063,794 + -0.7 3,063,825 + +0.1 3,063,833 - +0.3 3,063,946 - Dsui_2869 0.11 +1.9 3,063,947 - Dsui_2869 0.11 -0.3 3,064,002 + Dsui_2869 0.16 -2.0 3,064,194 - Dsui_2869 0.36 -0.9 3,064,356 + Dsui_2869 0.53 -1.8 3,064,465 + Dsui_2869 0.64 -0.3 3,064,545 - Dsui_2869 0.72 -0.5 3,064,632 - Dsui_2869 0.81 +0.2 3,064,633 + -0.1
Or see this region's nucleotide sequence