Experiment: Anaero. lactate (C), perchlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2544 and Dsui_2545 are separated by 14 nucleotides Dsui_2545 and Dsui_2546 are separated by 27 nucleotides
Dsui_2544: Dsui_2544 - disulfide bond chaperone, at 2,695,537 to 2,696,394
_2544
Dsui_2545: Dsui_2545 - transcriptional regulator, Spx/MgsR family, at 2,696,409 to 2,696,756
_2545
Dsui_2546: Dsui_2546 - transcriptional accessory protein, at 2,696,784 to 2,699,099
_2546
Position (kb)
2696
2697 Strain fitness (log2 ratio)
-2
-1
0
1 at 2695.411 kb on - strand at 2695.500 kb on + strand at 2695.508 kb on - strand at 2695.567 kb on - strand at 2695.706 kb on - strand, within Dsui_2544 at 2695.718 kb on - strand, within Dsui_2544 at 2695.750 kb on - strand, within Dsui_2544 at 2695.757 kb on - strand, within Dsui_2544 at 2695.865 kb on + strand at 2695.919 kb on - strand, within Dsui_2544 at 2696.053 kb on + strand, within Dsui_2544 at 2696.120 kb on + strand, within Dsui_2544 at 2696.204 kb on - strand, within Dsui_2544 at 2696.379 kb on + strand at 2696.503 kb on - strand, within Dsui_2545 at 2696.532 kb on - strand, within Dsui_2545 at 2696.589 kb on - strand, within Dsui_2545 at 2696.693 kb on + strand, within Dsui_2545 at 2696.741 kb on + strand at 2696.746 kb on + strand at 2696.746 kb on + strand at 2696.747 kb on + strand at 2696.804 kb on + strand at 2697.003 kb on - strand at 2697.088 kb on - strand, within Dsui_2546 at 2697.242 kb on - strand, within Dsui_2546 at 2697.289 kb on + strand, within Dsui_2546 at 2697.370 kb on + strand, within Dsui_2546 at 2697.448 kb on - strand, within Dsui_2546 at 2697.593 kb on - strand, within Dsui_2546 at 2697.623 kb on + strand, within Dsui_2546 at 2697.626 kb on - strand, within Dsui_2546 at 2697.626 kb on - strand, within Dsui_2546 at 2697.626 kb on - strand, within Dsui_2546 at 2697.641 kb on - strand, within Dsui_2546
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor remove 2,695,411 - +1.5 2,695,500 + +0.1 2,695,508 - +0.5 2,695,567 - -0.1 2,695,706 - Dsui_2544 0.20 -0.1 2,695,718 - Dsui_2544 0.21 -0.3 2,695,750 - Dsui_2544 0.25 -0.4 2,695,757 - Dsui_2544 0.26 -0.1 2,695,865 + +0.4 2,695,919 - Dsui_2544 0.45 +0.0 2,696,053 + Dsui_2544 0.60 +0.3 2,696,120 + Dsui_2544 0.68 -0.3 2,696,204 - Dsui_2544 0.78 +0.6 2,696,379 + +0.0 2,696,503 - Dsui_2545 0.27 +0.2 2,696,532 - Dsui_2545 0.35 -0.3 2,696,589 - Dsui_2545 0.52 -0.0 2,696,693 + Dsui_2545 0.82 -1.4 2,696,741 + +0.1 2,696,746 + -0.9 2,696,746 + -0.3 2,696,747 + -1.0 2,696,804 + -0.1 2,697,003 - -1.0 2,697,088 - Dsui_2546 0.13 -0.4 2,697,242 - Dsui_2546 0.20 -0.4 2,697,289 + Dsui_2546 0.22 +0.3 2,697,370 + Dsui_2546 0.25 -1.8 2,697,448 - Dsui_2546 0.29 -0.9 2,697,593 - Dsui_2546 0.35 -0.6 2,697,623 + Dsui_2546 0.36 -0.3 2,697,626 - Dsui_2546 0.36 -0.8 2,697,626 - Dsui_2546 0.36 -0.7 2,697,626 - Dsui_2546 0.36 -1.0 2,697,641 - Dsui_2546 0.37 +1.0
Or see this region's nucleotide sequence