Experiment: Anaero. lactate (C), perchlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2432 and Dsui_2433 are separated by 76 nucleotides Dsui_2433 and Dsui_2434 are separated by 143 nucleotides
Dsui_2432: Dsui_2432 - hypothetical protein, at 2,590,115 to 2,591,863
_2432
Dsui_2433: Dsui_2433 - aspartate/tyrosine/aromatic aminotransferase, at 2,591,940 to 2,593,148
_2433
Dsui_2434: Dsui_2434 - excinuclease ABC, B subunit, at 2,593,292 to 2,595,364
_2434
Position (kb)
2591
2592
2593
2594 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2591.002 kb on + strand, within Dsui_2432 at 2591.002 kb on + strand, within Dsui_2432 at 2591.129 kb on + strand, within Dsui_2432 at 2591.169 kb on + strand, within Dsui_2432 at 2591.212 kb on + strand at 2591.233 kb on + strand, within Dsui_2432 at 2591.349 kb on + strand, within Dsui_2432 at 2591.421 kb on + strand, within Dsui_2432 at 2591.475 kb on + strand, within Dsui_2432 at 2591.514 kb on + strand, within Dsui_2432 at 2591.514 kb on + strand, within Dsui_2432 at 2591.522 kb on - strand, within Dsui_2432 at 2591.534 kb on - strand at 2591.582 kb on - strand at 2591.621 kb on + strand, within Dsui_2432 at 2591.688 kb on + strand, within Dsui_2432 at 2591.737 kb on - strand at 2591.751 kb on + strand at 2591.788 kb on + strand at 2591.803 kb on - strand at 2591.815 kb on - strand at 2591.835 kb on - strand at 2591.843 kb on - strand at 2591.893 kb on + strand at 2591.893 kb on + strand at 2591.893 kb on + strand at 2592.083 kb on - strand, within Dsui_2433 at 2592.153 kb on - strand, within Dsui_2433 at 2592.153 kb on - strand, within Dsui_2433 at 2592.230 kb on + strand at 2592.230 kb on + strand, within Dsui_2433 at 2592.238 kb on - strand, within Dsui_2433 at 2592.253 kb on - strand, within Dsui_2433 at 2592.289 kb on - strand, within Dsui_2433 at 2592.289 kb on - strand, within Dsui_2433 at 2592.307 kb on + strand, within Dsui_2433 at 2592.321 kb on - strand, within Dsui_2433 at 2592.375 kb on - strand, within Dsui_2433 at 2592.434 kb on - strand, within Dsui_2433 at 2592.442 kb on + strand, within Dsui_2433 at 2592.478 kb on - strand, within Dsui_2433 at 2592.548 kb on - strand, within Dsui_2433 at 2592.762 kb on + strand, within Dsui_2433 at 2592.781 kb on + strand, within Dsui_2433 at 2592.834 kb on - strand, within Dsui_2433 at 2592.915 kb on - strand, within Dsui_2433 at 2592.915 kb on - strand, within Dsui_2433 at 2592.915 kb on - strand, within Dsui_2433 at 2592.919 kb on + strand, within Dsui_2433 at 2592.961 kb on + strand, within Dsui_2433 at 2593.054 kb on - strand at 2593.054 kb on - strand at 2593.054 kb on - strand at 2593.060 kb on - strand at 2593.154 kb on + strand at 2593.189 kb on + strand at 2593.440 kb on + strand at 2593.474 kb on + strand at 2593.555 kb on + strand, within Dsui_2434 at 2593.555 kb on + strand, within Dsui_2434 at 2593.555 kb on + strand, within Dsui_2434 at 2593.600 kb on + strand, within Dsui_2434 at 2593.611 kb on + strand, within Dsui_2434 at 2593.624 kb on + strand, within Dsui_2434 at 2593.638 kb on - strand, within Dsui_2434 at 2593.650 kb on + strand, within Dsui_2434 at 2593.650 kb on + strand, within Dsui_2434 at 2593.658 kb on - strand, within Dsui_2434 at 2593.719 kb on + strand, within Dsui_2434 at 2593.765 kb on + strand, within Dsui_2434 at 2593.947 kb on + strand, within Dsui_2434 at 2593.995 kb on + strand, within Dsui_2434 at 2594.007 kb on - strand, within Dsui_2434 at 2594.009 kb on + strand, within Dsui_2434 at 2594.145 kb on + strand, within Dsui_2434
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor remove 2,591,002 + Dsui_2432 0.51 +1.0 2,591,002 + Dsui_2432 0.51 +0.9 2,591,129 + Dsui_2432 0.58 +1.9 2,591,169 + Dsui_2432 0.60 -0.5 2,591,212 + -0.1 2,591,233 + Dsui_2432 0.64 -0.6 2,591,349 + Dsui_2432 0.71 +0.6 2,591,421 + Dsui_2432 0.75 -0.9 2,591,475 + Dsui_2432 0.78 -0.1 2,591,514 + Dsui_2432 0.80 -0.8 2,591,514 + Dsui_2432 0.80 -0.3 2,591,522 - Dsui_2432 0.80 -0.1 2,591,534 - -0.4 2,591,582 - +1.9 2,591,621 + Dsui_2432 0.86 +0.6 2,591,688 + Dsui_2432 0.90 +0.0 2,591,737 - +1.3 2,591,751 + +0.5 2,591,788 + -0.5 2,591,803 - -0.4 2,591,815 - +1.4 2,591,835 - +0.4 2,591,843 - +0.8 2,591,893 + +0.0 2,591,893 + -0.3 2,591,893 + -0.0 2,592,083 - Dsui_2433 0.12 -1.7 2,592,153 - Dsui_2433 0.18 -2.2 2,592,153 - Dsui_2433 0.18 -1.8 2,592,230 + -0.1 2,592,230 + Dsui_2433 0.24 -1.0 2,592,238 - Dsui_2433 0.25 -1.1 2,592,253 - Dsui_2433 0.26 -1.1 2,592,289 - Dsui_2433 0.29 -2.6 2,592,289 - Dsui_2433 0.29 -0.6 2,592,307 + Dsui_2433 0.30 -0.6 2,592,321 - Dsui_2433 0.32 -1.0 2,592,375 - Dsui_2433 0.36 -1.1 2,592,434 - Dsui_2433 0.41 -2.4 2,592,442 + Dsui_2433 0.42 -1.9 2,592,478 - Dsui_2433 0.44 -1.8 2,592,548 - Dsui_2433 0.50 -1.2 2,592,762 + Dsui_2433 0.68 -0.2 2,592,781 + Dsui_2433 0.70 -1.5 2,592,834 - Dsui_2433 0.74 -3.3 2,592,915 - Dsui_2433 0.81 -4.2 2,592,915 - Dsui_2433 0.81 -2.5 2,592,915 - Dsui_2433 0.81 -2.9 2,592,919 + Dsui_2433 0.81 -0.4 2,592,961 + Dsui_2433 0.84 -1.1 2,593,054 - -0.5 2,593,054 - -1.5 2,593,054 - -2.1 2,593,060 - -1.1 2,593,154 + -0.6 2,593,189 + -0.1 2,593,440 + +0.6 2,593,474 + +0.7 2,593,555 + Dsui_2434 0.13 +0.5 2,593,555 + Dsui_2434 0.13 -0.6 2,593,555 + Dsui_2434 0.13 -0.4 2,593,600 + Dsui_2434 0.15 -0.8 2,593,611 + Dsui_2434 0.15 -0.1 2,593,624 + Dsui_2434 0.16 -1.1 2,593,638 - Dsui_2434 0.17 -0.9 2,593,650 + Dsui_2434 0.17 -0.1 2,593,650 + Dsui_2434 0.17 -1.6 2,593,658 - Dsui_2434 0.18 -0.5 2,593,719 + Dsui_2434 0.21 -0.2 2,593,765 + Dsui_2434 0.23 -0.7 2,593,947 + Dsui_2434 0.32 -0.2 2,593,995 + Dsui_2434 0.34 -0.4 2,594,007 - Dsui_2434 0.34 -0.5 2,594,009 + Dsui_2434 0.35 -0.2 2,594,145 + Dsui_2434 0.41 +0.0
Or see this region's nucleotide sequence