Experiment: Anaero. lactate (C), perchlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2429 and Dsui_2430 are separated by 127 nucleotides Dsui_2430 and Dsui_2431 are separated by 54 nucleotides Dsui_2431 and Dsui_2432 are separated by 62 nucleotides
Dsui_2429: Dsui_2429 - putative permease, at 2,588,580 to 2,589,719
_2429
Dsui_2430: Dsui_2430 - tRNA-Asn, at 2,589,847 to 2,589,922
_2430
Dsui_2431: Dsui_2431 - tRNA-Asn, at 2,589,977 to 2,590,052
_2431
Dsui_2432: Dsui_2432 - hypothetical protein, at 2,590,115 to 2,591,863
_2432
Position (kb)
2589
2590
2591 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2588.984 kb on + strand at 2588.987 kb on - strand, within Dsui_2429 at 2589.034 kb on + strand, within Dsui_2429 at 2589.034 kb on - strand at 2589.062 kb on + strand at 2589.184 kb on + strand, within Dsui_2429 at 2589.184 kb on + strand, within Dsui_2429 at 2589.184 kb on + strand, within Dsui_2429 at 2589.192 kb on - strand at 2589.192 kb on - strand at 2589.244 kb on + strand at 2589.248 kb on + strand, within Dsui_2429 at 2589.252 kb on - strand at 2589.262 kb on + strand, within Dsui_2429 at 2589.270 kb on - strand, within Dsui_2429 at 2589.272 kb on + strand, within Dsui_2429 at 2589.290 kb on + strand, within Dsui_2429 at 2589.348 kb on + strand, within Dsui_2429 at 2589.371 kb on - strand, within Dsui_2429 at 2589.433 kb on - strand at 2589.513 kb on - strand at 2589.625 kb on + strand at 2589.664 kb on + strand at 2589.891 kb on - strand, within Dsui_2430 at 2589.938 kb on - strand at 2590.205 kb on + strand at 2590.205 kb on + strand at 2590.205 kb on + strand at 2590.440 kb on - strand at 2590.672 kb on - strand at 2590.706 kb on + strand, within Dsui_2432 at 2590.706 kb on + strand, within Dsui_2432 at 2590.712 kb on + strand, within Dsui_2432 at 2590.717 kb on + strand, within Dsui_2432 at 2590.735 kb on + strand, within Dsui_2432 at 2590.871 kb on + strand, within Dsui_2432 at 2590.879 kb on - strand at 2591.002 kb on + strand, within Dsui_2432 at 2591.002 kb on + strand, within Dsui_2432
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor remove 2,588,984 + +2.3 2,588,987 - Dsui_2429 0.36 +0.1 2,589,034 + Dsui_2429 0.40 +0.0 2,589,034 - +1.9 2,589,062 + -0.1 2,589,184 + Dsui_2429 0.53 -0.1 2,589,184 + Dsui_2429 0.53 -1.6 2,589,184 + Dsui_2429 0.53 +0.1 2,589,192 - +0.3 2,589,192 - -0.1 2,589,244 + +0.9 2,589,248 + Dsui_2429 0.59 +0.1 2,589,252 - +0.9 2,589,262 + Dsui_2429 0.60 +1.3 2,589,270 - Dsui_2429 0.61 -0.7 2,589,272 + Dsui_2429 0.61 -0.2 2,589,290 + Dsui_2429 0.62 +2.2 2,589,348 + Dsui_2429 0.67 +0.2 2,589,371 - Dsui_2429 0.69 -0.4 2,589,433 - -0.4 2,589,513 - +0.3 2,589,625 + +0.6 2,589,664 + +2.9 2,589,891 - Dsui_2430 0.58 -1.1 2,589,938 - -0.2 2,590,205 + -0.9 2,590,205 + +0.3 2,590,205 + -1.1 2,590,440 - +0.9 2,590,672 - +1.9 2,590,706 + Dsui_2432 0.34 -0.1 2,590,706 + Dsui_2432 0.34 +0.3 2,590,712 + Dsui_2432 0.34 -0.4 2,590,717 + Dsui_2432 0.34 -0.1 2,590,735 + Dsui_2432 0.35 +1.8 2,590,871 + Dsui_2432 0.43 -1.2 2,590,879 - +1.9 2,591,002 + Dsui_2432 0.51 +1.0 2,591,002 + Dsui_2432 0.51 +0.9
Or see this region's nucleotide sequence