Experiment: Anaero. lactate (C), perchlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2174 and Dsui_2175 are separated by 113 nucleotides Dsui_2175 and Dsui_2176 are separated by 147 nucleotides
Dsui_2174: Dsui_2174 - putative signal transduction protein, at 2,309,746 to 2,310,600
_2174
Dsui_2175: Dsui_2175 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, at 2,310,714 to 2,312,354
_2175
Dsui_2176: Dsui_2176 - putative esterase of the alpha-beta hydrolase superfamily, at 2,312,502 to 2,313,542
_2176
Position (kb)
2310
2311
2312
2313 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2309.770 kb on - strand at 2309.781 kb on - strand at 2309.866 kb on + strand at 2309.866 kb on + strand at 2309.874 kb on - strand, within Dsui_2174 at 2309.874 kb on - strand, within Dsui_2174 at 2309.879 kb on - strand, within Dsui_2174 at 2309.896 kb on + strand, within Dsui_2174 at 2309.904 kb on - strand, within Dsui_2174 at 2309.908 kb on + strand, within Dsui_2174 at 2309.945 kb on - strand, within Dsui_2174 at 2309.946 kb on + strand at 2309.989 kb on + strand at 2310.257 kb on + strand at 2310.265 kb on - strand, within Dsui_2174 at 2310.265 kb on - strand, within Dsui_2174 at 2310.305 kb on - strand, within Dsui_2174 at 2310.415 kb on - strand, within Dsui_2174 at 2310.451 kb on - strand, within Dsui_2174 at 2310.501 kb on - strand, within Dsui_2174 at 2310.617 kb on - strand at 2312.352 kb on - strand at 2312.368 kb on - strand at 2312.457 kb on + strand at 2312.466 kb on - strand at 2312.585 kb on + strand at 2312.613 kb on - strand at 2312.701 kb on - strand at 2312.701 kb on - strand, within Dsui_2176 at 2312.748 kb on + strand, within Dsui_2176 at 2312.774 kb on + strand, within Dsui_2176 at 2312.779 kb on + strand, within Dsui_2176 at 2312.800 kb on + strand, within Dsui_2176 at 2312.936 kb on + strand at 2313.083 kb on + strand, within Dsui_2176 at 2313.213 kb on - strand, within Dsui_2176 at 2313.217 kb on + strand, within Dsui_2176 at 2313.229 kb on + strand, within Dsui_2176 at 2313.351 kb on + strand, within Dsui_2176
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor remove 2,309,770 - +0.4 2,309,781 - +1.2 2,309,866 + +1.9 2,309,866 + +0.9 2,309,874 - Dsui_2174 0.15 +0.2 2,309,874 - Dsui_2174 0.15 -0.1 2,309,879 - Dsui_2174 0.16 +0.1 2,309,896 + Dsui_2174 0.18 +0.2 2,309,904 - Dsui_2174 0.18 -0.3 2,309,908 + Dsui_2174 0.19 +2.0 2,309,945 - Dsui_2174 0.23 +0.4 2,309,946 + +0.3 2,309,989 + +0.3 2,310,257 + +0.9 2,310,265 - Dsui_2174 0.61 +0.3 2,310,265 - Dsui_2174 0.61 -0.6 2,310,305 - Dsui_2174 0.65 +0.2 2,310,415 - Dsui_2174 0.78 +0.7 2,310,451 - Dsui_2174 0.82 -0.5 2,310,501 - Dsui_2174 0.88 -0.3 2,310,617 - -1.9 2,312,352 - +1.6 2,312,368 - +1.0 2,312,457 + +0.2 2,312,466 - +0.1 2,312,585 + +0.2 2,312,613 - +0.9 2,312,701 - -0.9 2,312,701 - Dsui_2176 0.19 -1.1 2,312,748 + Dsui_2176 0.24 +0.9 2,312,774 + Dsui_2176 0.26 -1.4 2,312,779 + Dsui_2176 0.27 +1.4 2,312,800 + Dsui_2176 0.29 +1.2 2,312,936 + +0.9 2,313,083 + Dsui_2176 0.56 -0.9 2,313,213 - Dsui_2176 0.68 -2.2 2,313,217 + Dsui_2176 0.69 -0.3 2,313,229 + Dsui_2176 0.70 -1.4 2,313,351 + Dsui_2176 0.82 -0.6
Or see this region's nucleotide sequence