Experiment: Anaero. lactate (C), perchlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1228 and Dsui_1229 are separated by 94 nucleotides Dsui_1229 and Dsui_1230 are separated by 15 nucleotides
Dsui_1228: Dsui_1228 - response regulator containing a CheY-like receiver domain and an HD-GYP domain, at 1,285,374 to 1,286,645
_1228
Dsui_1229: Dsui_1229 - Zn-dependent oxidoreductase, NADPH:quinone reductase, at 1,286,740 to 1,287,714
_1229
Dsui_1230: Dsui_1230 - TRAP-type uncharacterized transport system, periplasmic component, at 1,287,730 to 1,289,085
_1230
Position (kb)
1286
1287
1288 Strain fitness (log2 ratio)
-1
0
1
2 at 1286.095 kb on + strand, within Dsui_1228 at 1286.246 kb on + strand, within Dsui_1228 at 1286.264 kb on - strand, within Dsui_1228 at 1286.269 kb on - strand, within Dsui_1228 at 1286.307 kb on - strand, within Dsui_1228 at 1286.376 kb on - strand, within Dsui_1228 at 1286.489 kb on - strand, within Dsui_1228 at 1286.524 kb on - strand at 1286.563 kb on - strand at 1286.604 kb on - strand at 1286.624 kb on - strand at 1286.662 kb on - strand at 1286.697 kb on + strand at 1286.721 kb on + strand at 1286.790 kb on - strand at 1286.792 kb on + strand at 1286.889 kb on + strand, within Dsui_1229 at 1286.949 kb on - strand, within Dsui_1229 at 1287.266 kb on + strand, within Dsui_1229 at 1287.269 kb on - strand, within Dsui_1229 at 1287.354 kb on + strand, within Dsui_1229 at 1287.417 kb on - strand, within Dsui_1229 at 1287.419 kb on + strand, within Dsui_1229 at 1287.466 kb on - strand, within Dsui_1229 at 1287.477 kb on + strand, within Dsui_1229 at 1287.546 kb on - strand, within Dsui_1229 at 1287.583 kb on - strand at 1287.645 kb on - strand at 1287.692 kb on + strand at 1287.827 kb on + strand at 1287.941 kb on + strand, within Dsui_1230 at 1287.955 kb on - strand, within Dsui_1230 at 1287.955 kb on - strand, within Dsui_1230 at 1288.029 kb on + strand, within Dsui_1230 at 1288.029 kb on + strand, within Dsui_1230 at 1288.037 kb on - strand at 1288.038 kb on - strand, within Dsui_1230 at 1288.289 kb on + strand, within Dsui_1230 at 1288.289 kb on + strand, within Dsui_1230 at 1288.312 kb on + strand, within Dsui_1230 at 1288.422 kb on + strand, within Dsui_1230 at 1288.430 kb on - strand at 1288.430 kb on - strand, within Dsui_1230 at 1288.472 kb on - strand, within Dsui_1230 at 1288.516 kb on - strand, within Dsui_1230 at 1288.600 kb on + strand, within Dsui_1230 at 1288.608 kb on - strand, within Dsui_1230 at 1288.656 kb on - strand, within Dsui_1230 at 1288.684 kb on - strand, within Dsui_1230 at 1288.697 kb on + strand, within Dsui_1230 at 1288.705 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor remove 1,286,095 + Dsui_1228 0.57 -0.8 1,286,246 + Dsui_1228 0.69 -0.9 1,286,264 - Dsui_1228 0.70 +0.1 1,286,269 - Dsui_1228 0.70 -0.0 1,286,307 - Dsui_1228 0.73 +0.1 1,286,376 - Dsui_1228 0.79 -0.1 1,286,489 - Dsui_1228 0.88 +0.7 1,286,524 - +0.5 1,286,563 - +0.2 1,286,604 - +0.4 1,286,624 - -0.4 1,286,662 - +2.0 1,286,697 + -1.1 1,286,721 + +0.5 1,286,790 - -0.1 1,286,792 + -0.1 1,286,889 + Dsui_1229 0.15 -0.6 1,286,949 - Dsui_1229 0.21 +0.1 1,287,266 + Dsui_1229 0.54 -0.1 1,287,269 - Dsui_1229 0.54 +0.7 1,287,354 + Dsui_1229 0.63 -0.3 1,287,417 - Dsui_1229 0.69 -0.1 1,287,419 + Dsui_1229 0.70 +0.9 1,287,466 - Dsui_1229 0.74 -0.8 1,287,477 + Dsui_1229 0.76 +0.7 1,287,546 - Dsui_1229 0.83 +0.6 1,287,583 - +0.1 1,287,645 - -0.6 1,287,692 + +0.2 1,287,827 + -1.6 1,287,941 + Dsui_1230 0.16 +0.7 1,287,955 - Dsui_1230 0.17 +0.8 1,287,955 - Dsui_1230 0.17 +1.1 1,288,029 + Dsui_1230 0.22 -0.5 1,288,029 + Dsui_1230 0.22 -0.1 1,288,037 - +0.4 1,288,038 - Dsui_1230 0.23 +0.1 1,288,289 + Dsui_1230 0.41 -0.1 1,288,289 + Dsui_1230 0.41 -1.3 1,288,312 + Dsui_1230 0.43 -0.3 1,288,422 + Dsui_1230 0.51 -0.3 1,288,430 - -0.6 1,288,430 - Dsui_1230 0.52 -1.4 1,288,472 - Dsui_1230 0.55 +0.7 1,288,516 - Dsui_1230 0.58 -0.6 1,288,600 + Dsui_1230 0.64 +0.2 1,288,608 - Dsui_1230 0.65 +0.2 1,288,656 - Dsui_1230 0.68 -1.2 1,288,684 - Dsui_1230 0.70 -0.4 1,288,697 + Dsui_1230 0.71 +0.9 1,288,705 - +0.9
Or see this region's nucleotide sequence