Experiment: Anaero. lactate (C), perchlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1200 and Dsui_1201 are separated by 22 nucleotides Dsui_1201 and Dsui_1202 are separated by 4 nucleotides Dsui_1202 and Dsui_1203 overlap by 23 nucleotides Dsui_1203 and Dsui_1204 are separated by 23 nucleotides
Dsui_1200: Dsui_1200 - glycyl-tRNA synthetase, tetrameric type, beta subunit, at 1,252,378 to 1,254,621
_1200
Dsui_1201: Dsui_1201 - histidinol-phosphate phosphatase family protein, at 1,254,644 to 1,255,192
_1201
Dsui_1202: Dsui_1202 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 1,255,197 to 1,255,940
_1202
Dsui_1203: Dsui_1203 - putative metal-dependent hydrolase, at 1,255,918 to 1,256,694
_1203
Dsui_1204: Dsui_1204 - lactoylglutathione lyase, at 1,256,718 to 1,257,104
_1204
Position (kb)
1255
1256 Strain fitness (log2 ratio)
-1
0
1 at 1256.077 kb on - strand, within Dsui_1203 at 1256.089 kb on - strand, within Dsui_1203 at 1256.121 kb on - strand, within Dsui_1203 at 1256.166 kb on - strand, within Dsui_1203 at 1256.171 kb on - strand, within Dsui_1203 at 1256.181 kb on + strand, within Dsui_1203 at 1256.384 kb on + strand, within Dsui_1203 at 1256.392 kb on - strand, within Dsui_1203 at 1256.430 kb on - strand, within Dsui_1203 at 1256.430 kb on - strand, within Dsui_1203 at 1256.646 kb on + strand at 1256.670 kb on + strand at 1256.759 kb on - strand, within Dsui_1204 at 1256.769 kb on + strand, within Dsui_1204 at 1256.769 kb on - strand, within Dsui_1204 at 1256.892 kb on - strand, within Dsui_1204 at 1256.911 kb on + strand, within Dsui_1204 at 1256.929 kb on + strand, within Dsui_1204
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor remove 1,256,077 - Dsui_1203 0.20 +0.3 1,256,089 - Dsui_1203 0.22 -0.7 1,256,121 - Dsui_1203 0.26 -1.0 1,256,166 - Dsui_1203 0.32 -1.1 1,256,171 - Dsui_1203 0.33 -0.4 1,256,181 + Dsui_1203 0.34 -0.2 1,256,384 + Dsui_1203 0.60 +0.2 1,256,392 - Dsui_1203 0.61 -1.2 1,256,430 - Dsui_1203 0.66 +1.4 1,256,430 - Dsui_1203 0.66 -0.8 1,256,646 + +1.0 1,256,670 + -0.5 1,256,759 - Dsui_1204 0.11 -1.0 1,256,769 + Dsui_1204 0.13 -1.1 1,256,769 - Dsui_1204 0.13 -0.9 1,256,892 - Dsui_1204 0.45 -0.1 1,256,911 + Dsui_1204 0.50 +0.0 1,256,929 + Dsui_1204 0.55 +0.1
Or see this region's nucleotide sequence