Strain Fitness in Dechlorosoma suillum PS around Dsui_0750

Experiment: Anaero. lactate (C), perchlorate electron acceptor

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0749 and Dsui_0750 are separated by 23 nucleotidesDsui_0750 and Dsui_0751 are separated by 1 nucleotides Dsui_0749: Dsui_0749 - PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein, at 747,299 to 750,160 _0749 Dsui_0750: Dsui_0750 - hypothetical protein, at 750,184 to 750,516 _0750 Dsui_0751: Dsui_0751 - Eco57I restriction endonuclease, at 750,518 to 751,729 _0751 Position (kb) 750 751Strain fitness (log2 ratio) -1 0 1 2 3at 749.188 kb on + strand, within Dsui_0749at 749.189 kb on + strand, within Dsui_0749at 749.226 kb on + strand, within Dsui_0749at 749.229 kb on - strand, within Dsui_0749at 749.262 kb on + strand, within Dsui_0749at 749.297 kb on + strand, within Dsui_0749at 749.302 kb on + strand, within Dsui_0749at 749.403 kb on + strand, within Dsui_0749at 749.422 kb on - strand, within Dsui_0749at 749.469 kb on - strand, within Dsui_0749at 749.512 kb on + strand, within Dsui_0749at 749.576 kb on + strand, within Dsui_0749at 749.623 kb on - strand, within Dsui_0749at 749.635 kb on - strand, within Dsui_0749at 749.640 kb on - strandat 749.670 kb on + strand, within Dsui_0749at 749.677 kb on + strand, within Dsui_0749at 749.685 kb on - strand, within Dsui_0749at 749.885 kb on + strandat 749.909 kb on + strandat 749.922 kb on - strandat 749.998 kb on - strandat 750.102 kb on - strandat 750.143 kb on - strandat 750.203 kb on + strandat 750.290 kb on - strand, within Dsui_0750at 750.373 kb on + strand, within Dsui_0750at 750.387 kb on + strandat 750.399 kb on + strand, within Dsui_0750at 750.399 kb on + strand, within Dsui_0750at 750.407 kb on - strand, within Dsui_0750at 750.419 kb on - strand, within Dsui_0750at 750.425 kb on - strand, within Dsui_0750at 750.560 kb on + strandat 750.577 kb on - strandat 750.620 kb on + strandat 750.706 kb on - strand, within Dsui_0751at 750.797 kb on - strand, within Dsui_0751at 750.840 kb on - strand, within Dsui_0751at 750.947 kb on + strandat 750.965 kb on + strand, within Dsui_0751at 750.980 kb on - strand, within Dsui_0751at 751.044 kb on + strand, within Dsui_0751at 751.051 kb on + strand, within Dsui_0751at 751.052 kb on - strand, within Dsui_0751at 751.059 kb on - strand, within Dsui_0751at 751.106 kb on - strand, within Dsui_0751at 751.170 kb on - strand, within Dsui_0751at 751.184 kb on - strand, within Dsui_0751at 751.188 kb on + strand, within Dsui_0751at 751.191 kb on - strand, within Dsui_0751at 751.193 kb on + strand, within Dsui_0751at 751.317 kb on - strand, within Dsui_0751at 751.398 kb on - strand, within Dsui_0751at 751.458 kb on + strand, within Dsui_0751at 751.458 kb on + strand, within Dsui_0751at 751.466 kb on - strand, within Dsui_0751at 751.466 kb on - strand, within Dsui_0751at 751.466 kb on - strand, within Dsui_0751at 751.509 kb on - strand, within Dsui_0751at 751.514 kb on - strand, within Dsui_0751

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Per-strain Table

Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor
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749,188 + Dsui_0749 0.66 +0.8
749,189 + Dsui_0749 0.66 +1.5
749,226 + Dsui_0749 0.67 -0.2
749,229 - Dsui_0749 0.67 +0.3
749,262 + Dsui_0749 0.69 +1.1
749,297 + Dsui_0749 0.70 +1.3
749,302 + Dsui_0749 0.70 +1.0
749,403 + Dsui_0749 0.74 +2.8
749,422 - Dsui_0749 0.74 +1.7
749,469 - Dsui_0749 0.76 +0.2
749,512 + Dsui_0749 0.77 +0.8
749,576 + Dsui_0749 0.80 +0.9
749,623 - Dsui_0749 0.81 +1.1
749,635 - Dsui_0749 0.82 +1.1
749,640 - +1.2
749,670 + Dsui_0749 0.83 +1.1
749,677 + Dsui_0749 0.83 +1.0
749,685 - Dsui_0749 0.83 +1.5
749,885 + +1.0
749,909 + -0.4
749,922 - +1.2
749,998 - +0.7
750,102 - +0.5
750,143 - +1.7
750,203 + -0.0
750,290 - Dsui_0750 0.32 -0.2
750,373 + Dsui_0750 0.57 +0.3
750,387 + -0.5
750,399 + Dsui_0750 0.65 +0.2
750,399 + Dsui_0750 0.65 +0.4
750,407 - Dsui_0750 0.67 +0.2
750,419 - Dsui_0750 0.71 -0.7
750,425 - Dsui_0750 0.72 -0.1
750,560 + +0.2
750,577 - +1.8
750,620 + +1.1
750,706 - Dsui_0751 0.16 +1.8
750,797 - Dsui_0751 0.23 +2.2
750,840 - Dsui_0751 0.27 +1.1
750,947 + +0.2
750,965 + Dsui_0751 0.37 +0.5
750,980 - Dsui_0751 0.38 -0.9
751,044 + Dsui_0751 0.43 +0.4
751,051 + Dsui_0751 0.44 +1.6
751,052 - Dsui_0751 0.44 +1.3
751,059 - Dsui_0751 0.45 +1.8
751,106 - Dsui_0751 0.49 +1.1
751,170 - Dsui_0751 0.54 +0.0
751,184 - Dsui_0751 0.55 +1.0
751,188 + Dsui_0751 0.55 +1.1
751,191 - Dsui_0751 0.56 -0.1
751,193 + Dsui_0751 0.56 +0.7
751,317 - Dsui_0751 0.66 -0.6
751,398 - Dsui_0751 0.73 +0.4
751,458 + Dsui_0751 0.78 -1.7
751,458 + Dsui_0751 0.78 +0.5
751,466 - Dsui_0751 0.78 +1.3
751,466 - Dsui_0751 0.78 +0.1
751,466 - Dsui_0751 0.78 +1.0
751,509 - Dsui_0751 0.82 +0.8
751,514 - Dsui_0751 0.82 +0.5

Or see this region's nucleotide sequence