Strain Fitness in Dechlorosoma suillum PS around Dsui_0746

Experiment: Anaero. lactate (C), perchlorate electron acceptor

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0745 and Dsui_0746 overlap by 13 nucleotidesDsui_0746 and Dsui_0747 are separated by 94 nucleotides Dsui_0745: Dsui_0745 - membrane-associated lipoprotein involved in thiamine biosynthesis, at 742,780 to 743,820 _0745 Dsui_0746: Dsui_0746 - glutathione synthetase, at 743,808 to 744,755 _0746 Dsui_0747: Dsui_0747 - glutamate--cysteine ligase, at 744,850 to 746,130 _0747 Position (kb) 743 744 745Strain fitness (log2 ratio) -1 0 1 2 3 4 5at 742.811 kb on - strandat 742.811 kb on - strandat 742.954 kb on - strand, within Dsui_0745at 742.959 kb on - strand, within Dsui_0745at 743.025 kb on - strand, within Dsui_0745at 743.076 kb on + strandat 743.138 kb on - strand, within Dsui_0745at 743.281 kb on + strand, within Dsui_0745at 743.771 kb on + strandat 743.863 kb on - strandat 743.955 kb on - strand, within Dsui_0746at 744.017 kb on + strand, within Dsui_0746at 744.104 kb on - strand, within Dsui_0746at 744.137 kb on - strand, within Dsui_0746at 744.152 kb on - strand, within Dsui_0746at 744.165 kb on + strand, within Dsui_0746at 744.192 kb on + strand, within Dsui_0746at 744.245 kb on + strandat 744.325 kb on - strand, within Dsui_0746at 744.350 kb on - strand, within Dsui_0746at 744.358 kb on - strand, within Dsui_0746at 744.403 kb on + strand, within Dsui_0746at 744.436 kb on + strand, within Dsui_0746at 744.438 kb on - strand, within Dsui_0746at 744.455 kb on + strandat 744.459 kb on + strandat 744.471 kb on - strand, within Dsui_0746at 744.545 kb on - strand, within Dsui_0746at 744.626 kb on + strand, within Dsui_0746at 744.626 kb on + strand, within Dsui_0746at 744.654 kb on + strand, within Dsui_0746at 744.712 kb on + strandat 744.712 kb on + strandat 744.712 kb on + strandat 744.717 kb on + strandat 744.720 kb on - strandat 744.722 kb on + strandat 744.722 kb on + strandat 744.803 kb on + strandat 744.829 kb on - strandat 744.840 kb on + strandat 744.955 kb on - strandat 744.999 kb on - strand, within Dsui_0747at 745.019 kb on - strand, within Dsui_0747at 745.143 kb on - strand, within Dsui_0747at 745.178 kb on - strand, within Dsui_0747at 745.189 kb on - strand, within Dsui_0747at 745.607 kb on - strand, within Dsui_0747at 745.614 kb on + strandat 745.683 kb on + strand, within Dsui_0747at 745.701 kb on + strand, within Dsui_0747at 745.709 kb on - strand, within Dsui_0747

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Per-strain Table

Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor
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742,811 - -0.2
742,811 - -0.7
742,954 - Dsui_0745 0.17 +1.1
742,959 - Dsui_0745 0.17 +0.8
743,025 - Dsui_0745 0.24 +0.2
743,076 + -1.2
743,138 - Dsui_0745 0.34 -0.6
743,281 + Dsui_0745 0.48 +0.8
743,771 + -0.2
743,863 - +1.1
743,955 - Dsui_0746 0.16 +1.8
744,017 + Dsui_0746 0.22 +1.9
744,104 - Dsui_0746 0.31 +1.7
744,137 - Dsui_0746 0.35 +1.9
744,152 - Dsui_0746 0.36 -1.0
744,165 + Dsui_0746 0.38 +3.1
744,192 + Dsui_0746 0.41 +2.0
744,245 + +1.8
744,325 - Dsui_0746 0.55 +1.9
744,350 - Dsui_0746 0.57 +1.9
744,358 - Dsui_0746 0.58 +1.2
744,403 + Dsui_0746 0.63 +1.4
744,436 + Dsui_0746 0.66 +2.1
744,438 - Dsui_0746 0.66 +0.5
744,455 + +0.6
744,459 + +0.2
744,471 - Dsui_0746 0.70 +1.4
744,545 - Dsui_0746 0.78 +0.3
744,626 + Dsui_0746 0.86 +4.6
744,626 + Dsui_0746 0.86 -0.5
744,654 + Dsui_0746 0.89 +2.8
744,712 + +1.9
744,712 + +3.4
744,712 + +2.5
744,717 + +3.6
744,720 - +0.1
744,722 + +2.6
744,722 + +3.0
744,803 + +1.2
744,829 - +0.8
744,840 + +0.2
744,955 - -0.8
744,999 - Dsui_0747 0.12 +1.3
745,019 - Dsui_0747 0.13 +3.1
745,143 - Dsui_0747 0.23 +1.7
745,178 - Dsui_0747 0.26 +1.6
745,189 - Dsui_0747 0.26 +5.0
745,607 - Dsui_0747 0.59 +1.8
745,614 + +1.8
745,683 + Dsui_0747 0.65 +2.7
745,701 + Dsui_0747 0.66 +2.0
745,709 - Dsui_0747 0.67 +3.2

Or see this region's nucleotide sequence