Experiment: Anaero. lactate (C), perchlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0745 and Dsui_0746 overlap by 13 nucleotides Dsui_0746 and Dsui_0747 are separated by 94 nucleotides
Dsui_0745: Dsui_0745 - membrane-associated lipoprotein involved in thiamine biosynthesis, at 742,780 to 743,820
_0745
Dsui_0746: Dsui_0746 - glutathione synthetase, at 743,808 to 744,755
_0746
Dsui_0747: Dsui_0747 - glutamate--cysteine ligase, at 744,850 to 746,130
_0747
Position (kb)
743
744
745 Strain fitness (log2 ratio)
-1
0
1
2
3
4
5 at 742.811 kb on - strand at 742.811 kb on - strand at 742.954 kb on - strand, within Dsui_0745 at 742.959 kb on - strand, within Dsui_0745 at 743.025 kb on - strand, within Dsui_0745 at 743.076 kb on + strand at 743.138 kb on - strand, within Dsui_0745 at 743.281 kb on + strand, within Dsui_0745 at 743.771 kb on + strand at 743.863 kb on - strand at 743.955 kb on - strand, within Dsui_0746 at 744.017 kb on + strand, within Dsui_0746 at 744.104 kb on - strand, within Dsui_0746 at 744.137 kb on - strand, within Dsui_0746 at 744.152 kb on - strand, within Dsui_0746 at 744.165 kb on + strand, within Dsui_0746 at 744.192 kb on + strand, within Dsui_0746 at 744.245 kb on + strand at 744.325 kb on - strand, within Dsui_0746 at 744.350 kb on - strand, within Dsui_0746 at 744.358 kb on - strand, within Dsui_0746 at 744.403 kb on + strand, within Dsui_0746 at 744.436 kb on + strand, within Dsui_0746 at 744.438 kb on - strand, within Dsui_0746 at 744.455 kb on + strand at 744.459 kb on + strand at 744.471 kb on - strand, within Dsui_0746 at 744.545 kb on - strand, within Dsui_0746 at 744.626 kb on + strand, within Dsui_0746 at 744.626 kb on + strand, within Dsui_0746 at 744.654 kb on + strand, within Dsui_0746 at 744.712 kb on + strand at 744.712 kb on + strand at 744.712 kb on + strand at 744.717 kb on + strand at 744.720 kb on - strand at 744.722 kb on + strand at 744.722 kb on + strand at 744.803 kb on + strand at 744.829 kb on - strand at 744.840 kb on + strand at 744.955 kb on - strand at 744.999 kb on - strand, within Dsui_0747 at 745.019 kb on - strand, within Dsui_0747 at 745.143 kb on - strand, within Dsui_0747 at 745.178 kb on - strand, within Dsui_0747 at 745.189 kb on - strand, within Dsui_0747 at 745.607 kb on - strand, within Dsui_0747 at 745.614 kb on + strand at 745.683 kb on + strand, within Dsui_0747 at 745.701 kb on + strand, within Dsui_0747 at 745.709 kb on - strand, within Dsui_0747
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor remove 742,811 - -0.2 742,811 - -0.7 742,954 - Dsui_0745 0.17 +1.1 742,959 - Dsui_0745 0.17 +0.8 743,025 - Dsui_0745 0.24 +0.2 743,076 + -1.2 743,138 - Dsui_0745 0.34 -0.6 743,281 + Dsui_0745 0.48 +0.8 743,771 + -0.2 743,863 - +1.1 743,955 - Dsui_0746 0.16 +1.8 744,017 + Dsui_0746 0.22 +1.9 744,104 - Dsui_0746 0.31 +1.7 744,137 - Dsui_0746 0.35 +1.9 744,152 - Dsui_0746 0.36 -1.0 744,165 + Dsui_0746 0.38 +3.1 744,192 + Dsui_0746 0.41 +2.0 744,245 + +1.8 744,325 - Dsui_0746 0.55 +1.9 744,350 - Dsui_0746 0.57 +1.9 744,358 - Dsui_0746 0.58 +1.2 744,403 + Dsui_0746 0.63 +1.4 744,436 + Dsui_0746 0.66 +2.1 744,438 - Dsui_0746 0.66 +0.5 744,455 + +0.6 744,459 + +0.2 744,471 - Dsui_0746 0.70 +1.4 744,545 - Dsui_0746 0.78 +0.3 744,626 + Dsui_0746 0.86 +4.6 744,626 + Dsui_0746 0.86 -0.5 744,654 + Dsui_0746 0.89 +2.8 744,712 + +1.9 744,712 + +3.4 744,712 + +2.5 744,717 + +3.6 744,720 - +0.1 744,722 + +2.6 744,722 + +3.0 744,803 + +1.2 744,829 - +0.8 744,840 + +0.2 744,955 - -0.8 744,999 - Dsui_0747 0.12 +1.3 745,019 - Dsui_0747 0.13 +3.1 745,143 - Dsui_0747 0.23 +1.7 745,178 - Dsui_0747 0.26 +1.6 745,189 - Dsui_0747 0.26 +5.0 745,607 - Dsui_0747 0.59 +1.8 745,614 + +1.8 745,683 + Dsui_0747 0.65 +2.7 745,701 + Dsui_0747 0.66 +2.0 745,709 - Dsui_0747 0.67 +3.2
Or see this region's nucleotide sequence