Experiment: Anaero. lactate (C), perchlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0683 and Dsui_0684 are separated by 105 nucleotides Dsui_0684 and Dsui_0685 are separated by 30 nucleotides Dsui_0685 and Dsui_0686 are separated by 8 nucleotides
Dsui_0683: Dsui_0683 - soluble lytic murein transglycosylase-like protein, at 680,289 to 682,277
_0683
Dsui_0684: Dsui_0684 - putative nucleoside-diphosphate sugar epimerase, at 682,383 to 683,342
_0684
Dsui_0685: Dsui_0685 - glutathione S-transferase, at 683,373 to 684,008
_0685
Dsui_0686: Dsui_0686 - tRNA nucleotidyltransferase/poly(A) polymerase, at 684,017 to 685,237
_0686
Position (kb) 682
683
684 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 681.386 kb on + strand, within Dsui_0683 at 681.526 kb on + strand, within Dsui_0683 at 681.593 kb on + strand, within Dsui_0683 at 681.671 kb on - strand, within Dsui_0683 at 681.727 kb on + strand, within Dsui_0683 at 681.757 kb on - strand, within Dsui_0683 at 681.861 kb on - strand, within Dsui_0683 at 681.948 kb on - strand, within Dsui_0683 at 681.952 kb on + strand, within Dsui_0683 at 681.962 kb on + strand, within Dsui_0683 at 681.991 kb on + strand, within Dsui_0683 at 682.015 kb on - strand, within Dsui_0683 at 682.168 kb on - strand at 682.198 kb on - strand at 682.234 kb on - strand at 682.308 kb on + strand at 682.328 kb on - strand at 682.355 kb on - strand at 682.356 kb on + strand at 682.361 kb on - strand at 682.369 kb on + strand at 682.377 kb on - strand at 682.518 kb on + strand, within Dsui_0684 at 682.664 kb on + strand, within Dsui_0684 at 682.672 kb on - strand at 682.750 kb on - strand, within Dsui_0684 at 682.768 kb on + strand, within Dsui_0684 at 682.881 kb on + strand, within Dsui_0684 at 682.891 kb on + strand, within Dsui_0684 at 682.899 kb on - strand, within Dsui_0684 at 682.901 kb on + strand, within Dsui_0684 at 682.909 kb on - strand, within Dsui_0684 at 682.914 kb on - strand, within Dsui_0684 at 682.917 kb on + strand, within Dsui_0684 at 682.974 kb on + strand, within Dsui_0684 at 683.001 kb on - strand at 683.011 kb on + strand, within Dsui_0684 at 683.019 kb on - strand, within Dsui_0684 at 683.019 kb on - strand, within Dsui_0684 at 683.023 kb on + strand, within Dsui_0684 at 683.031 kb on - strand, within Dsui_0684 at 683.031 kb on - strand, within Dsui_0684 at 683.043 kb on + strand, within Dsui_0684 at 683.046 kb on - strand, within Dsui_0684 at 683.047 kb on + strand, within Dsui_0684 at 683.135 kb on + strand, within Dsui_0684 at 683.278 kb on + strand at 683.492 kb on + strand, within Dsui_0685 at 683.520 kb on + strand, within Dsui_0685 at 683.800 kb on - strand at 683.830 kb on + strand, within Dsui_0685 at 683.899 kb on - strand, within Dsui_0685
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor remove 681,386 + Dsui_0683 0.55 -1.0 681,526 + Dsui_0683 0.62 -0.1 681,593 + Dsui_0683 0.66 -0.4 681,671 - Dsui_0683 0.69 +0.4 681,727 + Dsui_0683 0.72 +0.4 681,757 - Dsui_0683 0.74 -0.2 681,861 - Dsui_0683 0.79 -1.9 681,948 - Dsui_0683 0.83 -0.0 681,952 + Dsui_0683 0.84 -0.4 681,962 + Dsui_0683 0.84 +0.7 681,991 + Dsui_0683 0.86 -0.3 682,015 - Dsui_0683 0.87 -0.3 682,168 - +0.2 682,198 - -0.7 682,234 - +0.2 682,308 + +1.0 682,328 - -0.5 682,355 - +0.3 682,356 + +0.5 682,361 - +0.9 682,369 + -0.6 682,377 - +0.2 682,518 + Dsui_0684 0.14 -1.7 682,664 + Dsui_0684 0.29 -0.3 682,672 - -1.0 682,750 - Dsui_0684 0.38 -1.0 682,768 + Dsui_0684 0.40 -1.7 682,881 + Dsui_0684 0.52 -0.4 682,891 + Dsui_0684 0.53 +0.4 682,899 - Dsui_0684 0.54 -3.2 682,901 + Dsui_0684 0.54 -0.8 682,909 - Dsui_0684 0.55 -1.3 682,914 - Dsui_0684 0.55 -0.9 682,917 + Dsui_0684 0.56 -0.5 682,974 + Dsui_0684 0.62 -1.7 683,001 - -1.0 683,011 + Dsui_0684 0.65 -0.1 683,019 - Dsui_0684 0.66 -2.9 683,019 - Dsui_0684 0.66 -2.1 683,023 + Dsui_0684 0.67 +0.4 683,031 - Dsui_0684 0.68 -2.3 683,031 - Dsui_0684 0.68 -1.0 683,043 + Dsui_0684 0.69 -0.7 683,046 - Dsui_0684 0.69 -0.5 683,047 + Dsui_0684 0.69 -0.8 683,135 + Dsui_0684 0.78 -0.3 683,278 + -0.2 683,492 + Dsui_0685 0.19 -1.2 683,520 + Dsui_0685 0.23 +0.2 683,800 - +0.2 683,830 + Dsui_0685 0.72 -0.2 683,899 - Dsui_0685 0.83 -0.6
Or see this region's nucleotide sequence