Strain Fitness in Dechlorosoma suillum PS around Dsui_0239

Experiment: Anaero. lactate (C), perchlorate electron acceptor

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntDsui_0238 and Dsui_0239 overlap by 4 nucleotidesDsui_0239 and Dsui_0240 are separated by 30 nucleotides Dsui_0238: Dsui_0238 - cell division protein FtsW, at 236,692 to 237,858 _0238 Dsui_0239: Dsui_0239 - UDP-N-acetylmuramoylalanine--D-glutamate ligase, at 237,855 to 239,213 _0239 Dsui_0240: Dsui_0240 - phospho-N-acetylmuramoyl-pentapeptide- transferase, at 239,244 to 240,347 _0240 Position (kb) 237 238 239 240Strain fitness (log2 ratio) -1 0 1 2at 239.250 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor
remove
239,250 - +2.0

Or see this region's nucleotide sequence