Strain Fitness in Shewanella amazonensis SB2B around Sama_1157

Experiment: L-Serine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Serine
1,409,370	+		Sama_1156	0.19	+1.1
1,409,371	-		Sama_1156	0.19	-1.6
1,409,391	-		Sama_1156	0.21	-0.7
1,409,408	+		Sama_1156	0.23	-0.4
1,409,408	+		Sama_1156	0.23	-1.5
1,409,408	+		Sama_1156	0.23	+1.7
1,409,409	-		Sama_1156	0.23	-0.6
1,409,409	-		Sama_1156	0.23	-0.5
1,409,409	-		Sama_1156	0.23	-1.2
1,409,409	-		Sama_1156	0.23	+0.3
1,409,412	+		Sama_1156	0.23	-2.1
1,409,413	-		Sama_1156	0.23	-0.9
1,409,413	-		Sama_1156	0.23	+0.6
1,409,413	-		Sama_1156	0.23	-1.8
1,409,506	+		Sama_1156	0.32	+1.7
1,409,542	+		Sama_1156	0.35	-1.1
1,409,543	-		Sama_1156	0.35	+1.0
1,409,554	+		Sama_1156	0.36	-0.4
1,409,554	+		Sama_1156	0.36	-0.3
1,409,555	-		Sama_1156	0.36	-0.8
1,409,649	+		Sama_1156	0.44	-1.5
1,409,650	-		Sama_1156	0.45	-0.1
1,409,650	-		Sama_1156	0.45	+0.4
1,409,650	-		Sama_1156	0.45	+0.4
1,409,650	-		Sama_1156	0.45	-1.5
1,409,687	+		Sama_1156	0.48	-1.4
1,409,687	+		Sama_1156	0.48	-0.9
1,409,776	-		Sama_1156	0.56	-0.7
1,409,776	-		Sama_1156	0.56	+1.1
1,409,797	+		Sama_1156	0.58	-0.5
1,409,797	+		Sama_1156	0.58	+1.3
1,409,798	-		Sama_1156	0.58	-2.1
1,409,798	-		Sama_1156	0.58	-3.3
1,409,798	-		Sama_1156	0.58	-0.6
1,409,798	-		Sama_1156	0.58	+0.1
1,409,857	-		Sama_1156	0.63	+0.1
1,409,857	-		Sama_1156	0.63	-0.2
1,409,857	-		Sama_1156	0.63	-1.1
1,409,880	-		Sama_1156	0.65	-1.3
1,409,885	-		Sama_1156	0.66	+0.3
1,409,885	-		Sama_1156	0.66	+1.0
1,409,885	-		Sama_1156	0.66	-0.0
1,409,885	-		Sama_1156	0.66	-1.1
1,409,887	-		Sama_1156	0.66	-1.4
1,409,956	-		Sama_1156	0.72	+1.2
1,409,956	-		Sama_1156	0.72	-0.1
1,409,956	-		Sama_1156	0.72	+0.1
1,410,045	+		Sama_1156	0.80	+0.1
1,410,045	+		Sama_1156	0.80	+0.5
1,410,046	-		Sama_1156	0.80	-0.9
1,410,046	-		Sama_1156	0.80	-0.6
1,410,064	+		Sama_1156	0.82	+1.3
1,410,064	+		Sama_1156	0.82	-1.1
1,410,064	+		Sama_1156	0.82	+0.5
1,410,065	-		Sama_1156	0.82	+0.8
1,410,090	+		Sama_1156	0.84	-0.3
1,410,090	+		Sama_1156	0.84	-1.8
1,410,146	+		Sama_1156	0.89	+0.2
1,410,146	+		Sama_1156	0.89	+0.9
1,410,147	-		Sama_1156	0.89	-1.6
1,410,147	-		Sama_1156	0.89	-0.6
1,410,147	-		Sama_1156	0.89	-1.3
1,410,147	-		Sama_1156	0.89	+0.3
1,410,147	-		Sama_1156	0.89	-0.1
1,410,147	-		Sama_1156	0.89	+1.1
1,410,147	-		Sama_1156	0.89	+0.1
1,410,246	+				-0.3
1,410,247	-				-1.2
1,410,247	-				-1.1
1,410,272	+				+0.1
1,410,273	-				-1.7
1,410,277	+				-0.5
1,410,278	-				+0.1
1,410,278	-				-0.5
1,410,286	+				-0.6
1,410,286	+				-0.7
1,410,286	+				+0.4
1,410,287	-				-0.5
1,410,320	+				+0.1
1,410,321	-				+0.1
1,410,337	+				+0.7
1,410,338	-				-0.5
1,410,355	-				-1.6
1,410,369	+				+0.4
1,410,405	+				+0.1
1,410,405	+				-1.2
1,410,405	+				+0.4
1,410,448	+				-0.1
1,410,449	-				+1.0
1,410,468	+		Sama_1157	0.10	+0.2
1,410,475	-		Sama_1157	0.11	+0.9
1,410,475	-		Sama_1157	0.11	-0.2
1,410,475	-		Sama_1157	0.11	-0.5
1,410,489	+		Sama_1157	0.12	-1.8
1,410,489	+		Sama_1157	0.12	-1.2
1,410,490	-		Sama_1157	0.12	+0.5
1,410,492	+		Sama_1157	0.12	+0.5
1,410,704	+		Sama_1157	0.26	+0.1
1,410,764	+		Sama_1157	0.31	-0.3
1,410,764	+		Sama_1157	0.31	+0.1
1,410,765	-		Sama_1157	0.31	-0.0
1,410,854	+		Sama_1157	0.37	-0.3
1,410,854	+		Sama_1157	0.37	+0.8
1,410,954	-		Sama_1157	0.44	+0.7
1,411,064	+		Sama_1157	0.51	+0.6
1,411,070	+		Sama_1157	0.52	+0.4
1,411,071	-		Sama_1157	0.52	-0.3
1,411,110	-		Sama_1157	0.54	-0.3
1,411,110	-		Sama_1157	0.54	+1.0
1,411,110	-		Sama_1157	0.54	+1.7
1,411,133	+		Sama_1157	0.56	-0.3
1,411,145	+		Sama_1157	0.57	-0.9
1,411,145	+		Sama_1157	0.57	-3.5
1,411,145	+		Sama_1157	0.57	-0.4
1,411,156	+		Sama_1157	0.58	-0.9
1,411,156	+		Sama_1157	0.58	-0.8
1,411,157	-		Sama_1157	0.58	+1.7
1,411,157	-		Sama_1157	0.58	+1.4
1,411,163	-		Sama_1157	0.58	-1.1
1,411,214	+		Sama_1157	0.62	+0.7
1,411,273	+		Sama_1157	0.66	-0.9
1,411,277	+		Sama_1157	0.66	-1.6
1,411,277	+		Sama_1157	0.66	-0.5
1,411,277	+		Sama_1157	0.66	-0.2
1,411,277	+		Sama_1157	0.66	+0.7
1,411,277	+		Sama_1157	0.66	-0.3
1,411,277	+		Sama_1157	0.66	-1.1
1,411,277	+		Sama_1157	0.66	+1.1
1,411,277	+		Sama_1157	0.66	-0.2
1,411,277	+		Sama_1157	0.66	-1.8
1,411,277	+		Sama_1157	0.66	-0.0
1,411,277	+		Sama_1157	0.66	+0.3
1,411,278	-		Sama_1157	0.66	-0.2
1,411,278	-		Sama_1157	0.66	+0.6
1,411,278	-		Sama_1157	0.66	-0.5
1,411,278	-		Sama_1157	0.66	+0.1
1,411,278	-		Sama_1157	0.66	+0.6
1,411,278	-		Sama_1157	0.66	-0.5
1,411,309	+		Sama_1157	0.68	+0.1
1,411,355	+		Sama_1157	0.71	-0.3
1,411,376	-		Sama_1157	0.73	-0.4
1,411,376	-		Sama_1157	0.73	+0.7
1,411,393	-		Sama_1157	0.74	-0.2
1,411,393	-		Sama_1157	0.74	-1.6
1,411,418	+		Sama_1157	0.76	-0.4
1,411,418	+		Sama_1157	0.76	+1.0
1,411,446	+		Sama_1157	0.77	+0.3
1,411,446	+		Sama_1157	0.77	-0.0
1,411,446	+		Sama_1157	0.77	-1.6
1,411,447	-		Sama_1157	0.78	+2.3
1,411,447	-		Sama_1157	0.78	-0.5
1,411,461	+		Sama_1157	0.79	-0.9
1,411,461	+		Sama_1157	0.79	-1.0
1,411,461	+		Sama_1157	0.79	-0.3
1,411,461	+		Sama_1157	0.79	-1.9
1,411,461	+		Sama_1157	0.79	+0.2
1,411,461	+		Sama_1157	0.79	+1.7
1,411,462	-		Sama_1157	0.79	+0.0
1,411,463	+		Sama_1157	0.79	-0.4
1,411,463	+		Sama_1157	0.79	-0.3
1,411,463	+		Sama_1157	0.79	+1.1
1,411,463	+		Sama_1157	0.79	+0.7
1,411,463	+		Sama_1157	0.79	+0.2
1,411,463	+		Sama_1157	0.79	-1.0
1,411,463	+		Sama_1157	0.79	-0.9
1,411,463	+		Sama_1157	0.79	-2.1
1,411,463	+		Sama_1157	0.79	+1.1
1,411,464	-		Sama_1157	0.79	+0.9
1,411,488	+		Sama_1157	0.80	+1.1
1,411,535	+		Sama_1157	0.84	-0.4
1,411,535	+		Sama_1157	0.84	-0.5
1,411,535	+		Sama_1157	0.84	-0.3
1,411,536	-		Sama_1157	0.84	-1.9
1,411,542	-		Sama_1157	0.84	-0.3
1,411,542	-		Sama_1157	0.84	+1.1
1,411,647	+				-2.3
1,411,647	+				-0.6
1,411,647	+				-2.7
1,411,648	-				+0.1
1,411,648	-				+1.1
1,411,697	+				-1.4
1,411,701	+				-0.6
1,411,702	-				-1.8
1,411,702	-				-0.9
1,411,702	-				-1.6
1,411,719	+				+0.2
1,411,719	+				+1.0
1,411,751	+				-1.1
1,411,752	-				-0.3
1,411,752	-				+0.6
1,411,754	+				+0.1
1,411,922	+		Sama_1158	0.10	-0.0
1,411,923	-		Sama_1158	0.11	+0.6
1,412,013	+		Sama_1158	0.20	+0.1
1,412,014	-		Sama_1158	0.21	-0.7
1,412,016	+		Sama_1158	0.21	-1.9
1,412,017	-		Sama_1158	0.21	+0.4
1,412,105	+		Sama_1158	0.30	+1.7
1,412,126	+		Sama_1158	0.33	-0.4
1,412,127	-		Sama_1158	0.33	+0.1
1,412,127	-		Sama_1158	0.33	+1.7
1,412,127	-		Sama_1158	0.33	+0.8
1,412,177	+		Sama_1158	0.38	-0.1
1,412,178	-		Sama_1158	0.38	+0.1
1,412,214	+		Sama_1158	0.42	-0.6
1,412,214	+		Sama_1158	0.42	-1.0
1,412,215	-		Sama_1158	0.43	+0.1
1,412,278	+		Sama_1158	0.49	-0.2
1,412,628	+		Sama_1158	0.88	+0.1
1,412,629	-		Sama_1158	0.88	-2.6
1,412,629	-		Sama_1158	0.88	-0.2
1,412,629	-		Sama_1158	0.88	-0.1
1,412,629	-		Sama_1158	0.88	+1.3
1,412,698	+				-0.2
1,412,699	-				-0.7
1,412,699	-				-0.2
1,412,738	+				+0.9
1,412,739	-				-1.9
1,412,742	+				-1.3
1,412,742	+				-0.5
1,412,742	+				-1.3
1,412,743	-				+0.2
1,412,743	-				-0.0
1,412,745	+				-1.0
1,412,765	+				-0.3
1,412,766	-				+0.5
1,412,766	-				-1.0