Strain Fitness in Shewanella amazonensis SB2B around Sama_0993

Experiment: L-Serine

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Serine
1,200,187	-				-1.0
1,200,194	+				+1.2
1,200,195	-				-0.6
1,200,195	-				-0.3
1,200,198	+				+0.2
1,200,198	+				+0.1
1,200,198	+				-0.7
1,200,199	-				-0.4
1,200,199	-				+0.2
1,200,203	+				-2.3
1,200,354	+		Sama_0992	0.15	+0.8
1,200,386	+		Sama_0992	0.19	-0.6
1,200,386	+		Sama_0992	0.19	-0.1
1,200,386	+		Sama_0992	0.19	-0.2
1,200,386	+		Sama_0992	0.19	-0.7
1,200,489	-		Sama_0992	0.31	+0.4
1,200,534	-		Sama_0992	0.36	+0.8
1,200,534	-		Sama_0992	0.36	+1.8
1,200,534	-		Sama_0992	0.36	+0.0
1,200,558	-		Sama_0992	0.39	+0.2
1,200,614	+		Sama_0992	0.46	+0.6
1,200,614	+		Sama_0992	0.46	-1.5
1,200,691	+		Sama_0992	0.55	-0.0
1,200,691	+		Sama_0992	0.55	+0.5
1,200,691	+		Sama_0992	0.55	+1.5
1,200,692	-		Sama_0992	0.55	-0.2
1,200,692	-		Sama_0992	0.55	+0.8
1,200,800	+		Sama_0992	0.68	-2.2
1,200,906	+		Sama_0992	0.80	-1.9
1,200,907	-		Sama_0992	0.80	-0.2
1,200,932	+		Sama_0992	0.83	+0.2
1,200,938	+		Sama_0992	0.84	-0.7
1,200,939	-		Sama_0992	0.84	-0.2
1,200,985	-		Sama_0992	0.89	+0.2
1,200,994	+				-0.9
1,200,994	+				+1.1
1,200,994	+				+0.5
1,200,995	-				-0.9
1,200,995	-				-1.9
1,200,995	-				-0.9
1,200,995	-				-1.2
1,200,995	-				-1.2
1,201,100	+				+0.8
1,201,100	+				-0.5
1,201,100	+				+0.4
1,201,100	+				-1.5
1,201,100	+				+0.4
1,201,101	-				+1.2
1,201,101	-				-0.2
1,201,101	-				+0.2
1,201,101	-				-0.2
1,201,107	+				-1.0
1,201,107	+				+1.1
1,201,107	+				+1.8
1,201,107	+				-0.4
1,201,108	-				-0.2
1,201,108	-				-1.4
1,201,161	+				-0.4
1,201,161	+				+0.0
1,201,275	+				-1.3
1,201,276	-				-0.4
1,201,282	+				-0.6
1,201,309	+				+0.5
1,201,309	+				+1.1
1,201,309	+				-0.8
1,201,325	-				+0.1
1,201,343	-				-0.2
1,201,343	-				-0.4
1,201,343	-				+0.4
1,201,367	-				-0.5
1,201,386	+				-0.4
1,201,387	-				+0.2
1,201,397	+				+1.9
1,201,397	+				+0.2
1,201,397	+				-0.6
1,201,398	-				+1.8
1,201,424	-				-0.9
1,201,424	-				-0.2
1,201,478	-				-0.2
1,201,548	+		Sama_0993	0.10	+0.4
1,201,548	+		Sama_0993	0.10	+0.8
1,201,554	+		Sama_0993	0.10	-0.9
1,201,555	-		Sama_0993	0.11	-1.2
1,201,555	-		Sama_0993	0.11	+0.0
1,201,555	-		Sama_0993	0.11	-1.1
1,201,612	-		Sama_0993	0.12	-2.0
1,201,661	+		Sama_0993	0.13	+0.3
1,201,720	+		Sama_0993	0.15	+0.2
1,201,720	+		Sama_0993	0.15	-0.5
1,201,721	-		Sama_0993	0.15	+0.5
1,201,721	-		Sama_0993	0.15	+0.5
1,201,721	-		Sama_0993	0.15	-0.5
1,201,747	-		Sama_0993	0.16	+0.4
1,201,747	-		Sama_0993	0.16	-0.8
1,201,870	+		Sama_0993	0.19	-0.4
1,201,870	+		Sama_0993	0.19	+0.8
1,201,871	-		Sama_0993	0.19	+1.1
1,201,871	-		Sama_0993	0.19	-0.9
1,201,871	-		Sama_0993	0.19	+0.1
1,201,873	+		Sama_0993	0.19	-0.5
1,201,873	+		Sama_0993	0.19	-0.2
1,201,874	-		Sama_0993	0.19	+0.9
1,201,874	-		Sama_0993	0.19	-0.9
1,202,002	+		Sama_0993	0.22	+0.7
1,202,179	-		Sama_0993	0.27	+1.0
1,202,183	+		Sama_0993	0.27	-0.6
1,202,183	+		Sama_0993	0.27	+0.2
1,202,183	+		Sama_0993	0.27	+1.8
1,202,183	+		Sama_0993	0.27	+0.1
1,202,184	-		Sama_0993	0.27	-1.9
1,202,184	-		Sama_0993	0.27	-0.7
1,202,184	-		Sama_0993	0.27	-0.1
1,202,184	-		Sama_0993	0.27	-0.1
1,202,184	-		Sama_0993	0.27	-0.9
1,202,209	-		Sama_0993	0.28	-0.2
1,202,260	+		Sama_0993	0.29	-0.1
1,202,304	+		Sama_0993	0.30	-0.3
1,202,305	-		Sama_0993	0.31	-1.2
1,202,313	+		Sama_0993	0.31	+0.8
1,202,314	-		Sama_0993	0.31	-0.1
1,202,314	-		Sama_0993	0.31	-0.3
1,202,314	-		Sama_0993	0.31	-0.9
1,202,314	-		Sama_0993	0.31	+0.8
1,202,314	-		Sama_0993	0.31	+0.6
1,202,314	-		Sama_0993	0.31	-0.7
1,202,317	+		Sama_0993	0.31	+0.2
1,202,317	+		Sama_0993	0.31	-1.1
1,202,317	+		Sama_0993	0.31	-0.2
1,202,317	+		Sama_0993	0.31	+0.9
1,202,317	+		Sama_0993	0.31	+0.2
1,202,317	+		Sama_0993	0.31	+1.1
1,202,415	-		Sama_0993	0.33	-0.9
1,202,415	-		Sama_0993	0.33	+1.2
1,202,415	-		Sama_0993	0.33	-0.5
1,202,445	+		Sama_0993	0.34	-0.5
1,202,463	+		Sama_0993	0.35	+1.8
1,202,463	+		Sama_0993	0.35	-2.6
1,202,463	+		Sama_0993	0.35	+1.5
1,202,463	+		Sama_0993	0.35	-0.8
1,202,464	-		Sama_0993	0.35	+0.1
1,202,464	-		Sama_0993	0.35	+1.8
1,202,471	+		Sama_0993	0.35	-0.1
1,202,472	-		Sama_0993	0.35	-0.6
1,202,482	+		Sama_0993	0.35	-0.9
1,202,492	+		Sama_0993	0.35	-0.9
1,202,492	+		Sama_0993	0.35	+0.5
1,202,493	-		Sama_0993	0.36	-1.3
1,202,493	-		Sama_0993	0.36	+0.1
1,202,498	+		Sama_0993	0.36	-0.4
1,202,498	+		Sama_0993	0.36	-0.3
1,202,498	+		Sama_0993	0.36	-1.2
1,202,499	-		Sama_0993	0.36	+0.0
1,202,502	+		Sama_0993	0.36	+0.3
1,202,503	-		Sama_0993	0.36	-0.5
1,202,511	+		Sama_0993	0.36	-1.7
1,202,511	+		Sama_0993	0.36	-0.3
1,202,511	+		Sama_0993	0.36	-0.5
1,202,512	-		Sama_0993	0.36	-0.8
1,202,551	+		Sama_0993	0.37	-0.7
1,202,552	-		Sama_0993	0.37	-1.4
1,202,566	+		Sama_0993	0.37	-0.8
1,202,566	+		Sama_0993	0.37	-0.8
1,202,567	-		Sama_0993	0.37	-0.5
1,202,613	+		Sama_0993	0.39	-1.1
1,202,666	-		Sama_0993	0.40	-0.6
1,202,670	+		Sama_0993	0.40	-0.7
1,202,692	+		Sama_0993	0.41	+2.0
1,202,692	+		Sama_0993	0.41	+0.7
1,202,692	+		Sama_0993	0.41	-2.1
1,202,693	-		Sama_0993	0.41	-0.2
1,202,697	+		Sama_0993	0.41	-1.4
1,202,697	+		Sama_0993	0.41	+0.2
1,202,698	-		Sama_0993	0.41	-1.4
1,202,703	+		Sama_0993	0.41	-0.1
1,202,774	-		Sama_0993	0.43	+0.9
1,202,774	-		Sama_0993	0.43	-1.6
1,202,841	-		Sama_0993	0.45	-0.5
1,202,856	-		Sama_0993	0.45	-2.1
1,202,856	-		Sama_0993	0.45	-1.0
1,202,903	+		Sama_0993	0.46	-0.6
1,202,903	+		Sama_0993	0.46	-0.2
1,202,903	+		Sama_0993	0.46	-1.2
1,202,903	+		Sama_0993	0.46	-0.0
1,202,903	+		Sama_0993	0.46	+1.1
1,202,903	+		Sama_0993	0.46	-1.4
1,202,903	+		Sama_0993	0.46	+0.2
1,202,903	+		Sama_0993	0.46	-0.7
1,202,904	-		Sama_0993	0.46	+0.0
1,202,904	-		Sama_0993	0.46	+0.5
1,202,904	-		Sama_0993	0.46	-1.7
1,202,904	-		Sama_0993	0.46	+0.3
1,202,904	-		Sama_0993	0.46	-1.8
1,202,904	-		Sama_0993	0.46	-0.2
1,202,904	-		Sama_0993	0.46	-1.4
1,202,904	-		Sama_0993	0.46	+1.8
1,202,905	+		Sama_0993	0.46	+0.2
1,202,905	+		Sama_0993	0.46	-0.0
1,202,905	+		Sama_0993	0.46	+0.0
1,202,906	-		Sama_0993	0.47	-1.5
1,202,906	-		Sama_0993	0.47	+0.5
1,202,934	+		Sama_0993	0.47	-0.2
1,202,934	+		Sama_0993	0.47	+1.5
1,202,934	+		Sama_0993	0.47	-0.5
1,202,934	+		Sama_0993	0.47	-0.2
1,202,935	-		Sama_0993	0.47	-1.0
1,202,935	-		Sama_0993	0.47	+0.5
1,202,935	-		Sama_0993	0.47	+1.5
1,202,935	-		Sama_0993	0.47	+0.2
1,202,935	-		Sama_0993	0.47	-0.3
1,203,007	+		Sama_0993	0.49	+0.7
1,203,048	-		Sama_0993	0.50	+1.8
1,203,048	-		Sama_0993	0.50	+0.5
1,203,102	+		Sama_0993	0.52	+0.8
1,203,102	+		Sama_0993	0.52	-0.2
1,203,103	-		Sama_0993	0.52	-0.2
1,203,103	-		Sama_0993	0.52	-0.5
1,203,103	-		Sama_0993	0.52	-0.7
1,203,116	+		Sama_0993	0.52	+0.3
1,203,116	+		Sama_0993	0.52	+0.2
1,203,116	+		Sama_0993	0.52	-1.2
1,203,117	-		Sama_0993	0.52	+0.2
1,203,117	-		Sama_0993	0.52	-0.0
1,203,117	-		Sama_0993	0.52	+0.4
1,203,147	-		Sama_0993	0.53	-0.8
1,203,175	+		Sama_0993	0.54	-1.5
1,203,175	+		Sama_0993	0.54	-1.1
1,203,200	+		Sama_0993	0.54	-0.3
1,203,200	+		Sama_0993	0.54	-1.7
1,203,201	-		Sama_0993	0.54	-0.4
1,203,220	+		Sama_0993	0.55	+0.5
1,203,220	+		Sama_0993	0.55	-1.3
1,203,241	+		Sama_0993	0.55	-2.3
1,203,295	+		Sama_0993	0.57	+1.1
1,203,295	+		Sama_0993	0.57	+1.8
1,203,295	+		Sama_0993	0.57	+1.0
1,203,295	+		Sama_0993	0.57	+0.5
1,203,296	-		Sama_0993	0.57	-1.2
1,203,321	+		Sama_0993	0.58	-0.9
1,203,321	+		Sama_0993	0.58	-0.5
1,203,321	+		Sama_0993	0.58	-1.2
1,203,322	-		Sama_0993	0.58	-0.8
1,203,322	-		Sama_0993	0.58	+0.2
1,203,322	-		Sama_0993	0.58	-1.3
1,203,322	-		Sama_0993	0.58	+1.1
1,203,322	-		Sama_0993	0.58	-0.4
1,203,391	+		Sama_0993	0.59	-0.2
1,203,505	-		Sama_0993	0.62	-0.5
1,203,505	-		Sama_0993	0.62	+0.8
1,203,505	-		Sama_0993	0.62	-0.3
1,203,505	-		Sama_0993	0.62	-0.2
1,203,701	+		Sama_0993	0.68	+1.2
1,203,702	-		Sama_0993	0.68	-1.0
1,203,702	-		Sama_0993	0.68	-0.7
1,203,704	+		Sama_0993	0.68	+0.3
1,203,704	+		Sama_0993	0.68	-1.4
1,203,704	+		Sama_0993	0.68	+0.7
1,203,705	-		Sama_0993	0.68	-0.4
1,203,705	-		Sama_0993	0.68	-3.2
1,203,705	-		Sama_0993	0.68	+0.2
1,203,723	-		Sama_0993	0.68	+0.8
1,203,737	+		Sama_0993	0.69	+0.5
1,203,738	-		Sama_0993	0.69	+1.5
1,203,814	+		Sama_0993	0.71	+0.5
1,203,815	-		Sama_0993	0.71	-0.6
1,203,841	+		Sama_0993	0.71	+0.6
1,203,841	+		Sama_0993	0.71	-0.8
1,203,841	+		Sama_0993	0.71	-0.9
1,203,842	-		Sama_0993	0.71	+0.2
1,203,842	-		Sama_0993	0.71	+0.0
1,203,842	-		Sama_0993	0.71	+0.2
1,203,842	-		Sama_0993	0.71	+0.1
1,203,842	-		Sama_0993	0.71	-0.4
1,203,842	-		Sama_0993	0.71	-0.0
1,203,880	+		Sama_0993	0.72	-0.3
1,203,984	+		Sama_0993	0.75	+0.1
1,204,009	+		Sama_0993	0.76	-0.5
1,204,044	-		Sama_0993	0.77	-0.4
1,204,064	-		Sama_0993	0.77	-2.1
1,204,064	-		Sama_0993	0.77	-0.0
1,204,091	+		Sama_0993	0.78	-2.5
1,204,092	-		Sama_0993	0.78	-0.4
1,204,122	+		Sama_0993	0.79	-2.1
1,204,123	-		Sama_0993	0.79	-1.0
1,204,123	-		Sama_0993	0.79	-0.8
1,204,123	-		Sama_0993	0.79	+1.1
1,204,123	-		Sama_0993	0.79	-0.5
1,204,394	-		Sama_0993	0.86	-0.5
1,204,394	-		Sama_0993	0.86	+0.1
1,204,397	+		Sama_0993	0.86	+1.4
1,204,397	+		Sama_0993	0.86	-1.2
1,204,397	+		Sama_0993	0.86	+0.9
1,204,397	+		Sama_0993	0.86	-0.4
1,204,397	+		Sama_0993	0.86	-0.2
1,204,397	+		Sama_0993	0.86	+1.8
1,204,397	+		Sama_0993	0.86	+0.2
1,204,398	-		Sama_0993	0.86	-0.8
1,204,398	-		Sama_0993	0.86	+0.7
1,204,398	-		Sama_0993	0.86	-0.9
1,204,398	-		Sama_0993	0.86	-1.1
1,204,398	-		Sama_0993	0.86	-0.1
1,204,398	-		Sama_0993	0.86	-1.1
1,204,398	-		Sama_0993	0.86	-0.9
1,204,400	+		Sama_0993	0.86	-1.4
1,204,400	+		Sama_0993	0.86	-1.0
1,204,400	+		Sama_0993	0.86	-0.2
1,204,400	+		Sama_0993	0.86	+0.7
1,204,400	+		Sama_0993	0.86	+0.8
1,204,400	+		Sama_0993	0.86	-0.9
1,204,433	+		Sama_0993	0.87	+0.8
1,204,434	-		Sama_0993	0.87	-0.3
1,204,478	-		Sama_0993	0.88	+0.8
1,204,573	+				-0.4
1,204,573	+				+1.1
1,204,573	+				-1.8
1,204,574	-				+0.2
1,204,574	-				+0.2
1,204,574	-				-1.6
1,204,574	-				-1.1
1,204,574	-				+0.8
1,204,590	+				-0.0
1,204,590	+				+1.6
1,204,590	+				+0.6
1,204,590	+				+0.2
1,204,620	-				-1.2
1,204,649	+				+1.2
1,204,649	+				-0.2
1,204,650	-				+0.8
1,204,650	-				-0.1
1,204,660	+				-0.8
1,204,660	+				-1.0
1,204,660	+				-1.0
1,204,660	+				+1.2
1,204,709	-				+0.5
1,204,718	-				-1.2
1,204,725	+				-0.2
1,204,725	+				-1.5
1,204,725	+				+1.6
1,204,725	+				-0.6
1,204,762	-				-1.5
1,204,762	-				-0.8
1,204,795	+				-1.2
1,204,796	-				+0.8
1,204,843	+				+0.4
1,204,843	+				+1.2
1,204,843	+				-0.6
1,204,843	+				-1.1
1,204,845	+				-0.8
1,204,845	+				-0.4
1,204,845	+				-1.2
1,204,852	-				+1.2
1,204,852	-				-1.5
1,204,915	-				+1.8
1,204,915	-				-2.2
1,204,930	+				+1.3
1,204,930	+				+0.2
1,204,930	+				-0.7
1,204,931	-				-0.4
1,204,931	-				+1.4
1,204,934	+				+0.1
1,204,934	+				+0.7
1,204,938	+				-0.1
1,204,938	+				+0.8
1,204,938	+				+0.6
1,204,939	-				+1.8
1,204,946	-				+0.5
1,204,946	-				+0.5
1,205,029	+				-0.2
1,205,073	+				-1.1
1,205,156	+				-1.0
1,205,157	-				+1.4
1,205,157	-				+0.5
1,205,157	-				+0.2
1,205,157	-				-0.1
1,205,157	-				-0.5
1,205,238	+		Sama_0994	0.16	-1.0
1,205,266	-		Sama_0994	0.18	-0.3
1,205,319	+		Sama_0994	0.22	-0.3
1,205,354	+		Sama_0994	0.24	+0.1
1,205,355	-		Sama_0994	0.24	-0.6
1,205,379	+		Sama_0994	0.26	-1.4
1,205,379	+		Sama_0994	0.26	-0.8
1,205,380	-		Sama_0994	0.26	-1.2
1,205,380	-		Sama_0994	0.26	-0.8
1,205,380	-		Sama_0994	0.26	-0.2
1,205,383	+		Sama_0994	0.26	+0.3
1,205,383	+		Sama_0994	0.26	-1.1
1,205,383	+		Sama_0994	0.26	-1.9
1,205,383	+		Sama_0994	0.26	-1.0
1,205,383	+		Sama_0994	0.26	+0.2
1,205,383	+		Sama_0994	0.26	-0.4
1,205,383	+		Sama_0994	0.26	+1.8
1,205,383	+		Sama_0994	0.26	+0.2
1,205,383	+		Sama_0994	0.26	+0.3
1,205,384	-		Sama_0994	0.27	-0.9
1,205,498	+		Sama_0994	0.35	-0.7
1,205,498	+		Sama_0994	0.35	+1.2
1,205,499	-		Sama_0994	0.35	+0.2
1,205,499	-		Sama_0994	0.35	-0.8
1,205,570	+		Sama_0994	0.40	+0.2
1,205,570	+		Sama_0994	0.40	+1.5
1,205,570	+		Sama_0994	0.40	+1.5
1,205,570	+		Sama_0994	0.40	-1.4
1,205,570	+		Sama_0994	0.40	+0.3
1,205,570	+		Sama_0994	0.40	+0.8
1,205,571	-		Sama_0994	0.40	+0.8
1,205,571	-		Sama_0994	0.40	-0.9
1,205,571	-		Sama_0994	0.40	-1.2
1,205,571	-		Sama_0994	0.40	-0.0
1,205,571	-		Sama_0994	0.40	+0.6
1,205,571	-		Sama_0994	0.40	+0.3
1,205,571	-		Sama_0994	0.40	-0.7
1,205,571	-		Sama_0994	0.40	-0.5
1,205,571	-		Sama_0994	0.40	-0.3
1,205,571	-		Sama_0994	0.40	-0.8
1,205,571	-		Sama_0994	0.40	+0.4
1,205,571	-		Sama_0994	0.40	-0.2
1,205,652	-		Sama_0994	0.46	-0.9
1,205,652	-		Sama_0994	0.46	-0.8
1,205,652	-		Sama_0994	0.46	-1.9
1,205,659	+		Sama_0994	0.47	-0.6
1,205,659	+		Sama_0994	0.47	-1.4
1,205,659	+		Sama_0994	0.47	-0.1
1,205,660	-		Sama_0994	0.47	-1.0
1,205,709	+		Sama_0994	0.50	-0.2
1,205,710	-		Sama_0994	0.51	+0.8
1,205,710	-		Sama_0994	0.51	-0.9
1,205,762	+		Sama_0994	0.54	+1.8
1,205,763	-		Sama_0994	0.54	-1.7
1,205,778	-		Sama_0994	0.56	+0.2
1,205,778	-		Sama_0994	0.56	-1.0
1,205,795	-		Sama_0994	0.57	-1.5
1,205,795	-		Sama_0994	0.57	-0.1
1,205,795	-		Sama_0994	0.57	-2.1
1,205,832	+		Sama_0994	0.60	+1.1
1,205,832	+		Sama_0994	0.60	-0.5
1,205,832	+		Sama_0994	0.60	-0.6
1,205,833	-		Sama_0994	0.60	-0.3
1,205,833	-		Sama_0994	0.60	+0.6
1,205,833	-		Sama_0994	0.60	+0.3
1,205,863	-		Sama_0994	0.62	-0.1