Strain Fitness in Shewanella oneidensis MR-1 around SO4649

Experiment: Fusidic 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.125 mg/ml
4,844,100	+		SO4648	0.39	-2.7
4,844,176	-		SO4648	0.45	-1.5
4,844,205	-		SO4648	0.47	-2.4
4,844,205	-		SO4648	0.47	-3.4
4,844,255	+		SO4648	0.51	-4.6
4,844,289	+		SO4648	0.53	-4.4
4,844,289	+		SO4648	0.53	-3.4
4,844,318	-		SO4648	0.55	-2.5
4,844,318	-		SO4648	0.55	-2.5
4,844,359	-		SO4648	0.58	-3.5
4,844,398	-		SO4648	0.61	-3.8
4,844,408	-		SO4648	0.62	-1.7
4,844,465	-		SO4648	0.66	-3.0
4,844,531	+		SO4648	0.71	-2.7
4,844,531	-		SO4648	0.71	-4.0
4,844,595	+		SO4648	0.76	-2.4
4,844,595	+		SO4648	0.76	-2.5
4,844,595	+		SO4648	0.76	-3.1
4,844,603	-		SO4648	0.76	-3.8
4,844,603	-		SO4648	0.76	-4.5
4,844,732	+		SO4648	0.86	-1.8
4,844,835	-				-3.4
4,845,076	+				-0.8
4,845,104	+				-0.6
4,845,125	+				+0.4
4,845,135	+				+0.3
4,845,143	-				+0.3
4,845,143	-				-0.3
4,845,297	+		SO4649	0.15	-0.6
4,845,309	+		SO4649	0.16	-0.9
4,845,309	+		SO4649	0.16	+0.8
4,845,309	+		SO4649	0.16	-0.7
4,845,317	-		SO4649	0.16	+1.5
4,845,317	-		SO4649	0.16	+0.4
4,845,386	+		SO4649	0.21	+0.1
4,845,394	-		SO4649	0.22	-1.5
4,845,500	+		SO4649	0.29	-0.2
4,845,532	+		SO4649	0.31	+0.7
4,845,540	-		SO4649	0.32	+0.1
4,845,624	+		SO4649	0.37	-0.3
4,845,629	+		SO4649	0.38	+0.1
4,845,646	+		SO4649	0.39	+0.9
4,845,654	-		SO4649	0.39	-0.0
4,845,827	-		SO4649	0.51	-0.5
4,845,881	+		SO4649	0.55	-0.1
4,845,897	+		SO4649	0.56	+0.3
4,845,905	-		SO4649	0.57	-0.3
4,846,001	+		SO4649	0.63	+0.1
4,846,045	+		SO4649	0.66	-0.9
4,846,101	+		SO4649	0.70	-0.2
4,846,114	+		SO4649	0.71	+0.3
4,846,168	-		SO4649	0.75	-0.3
4,846,180	+		SO4649	0.75	+0.2
4,846,378	+		SO4649	0.89	-0.9
4,846,413	-				-0.5
4,846,445	+				-1.0
4,846,445	+				+0.6
4,846,453	-				-0.7
4,846,460	+				+0.7
4,846,460	+				+0.4
4,846,469	+				-0.1
4,846,527	+				-0.2
4,846,527	+				+0.3
4,846,535	-				-0.9
4,846,535	-				+0.1
4,846,546	-				-0.4
4,846,561	-				-0.6
4,846,829	+				+0.8
4,846,846	+				-0.0
4,846,854	-				-0.1
4,846,854	-				-0.1
4,846,881	-				-0.1
4,847,028	+				-0.4
4,847,040	+				-0.2
4,847,048	-				-0.3
4,847,060	-				+0.3
4,847,137	+		SO4650	0.15	-0.1
4,847,143	+		SO4650	0.16	-0.8
4,847,151	-		SO4650	0.17	-0.9
4,847,202	+		SO4650	0.25	-0.7
4,847,263	-		SO4650	0.35	-1.0
4,847,501	+		SO4650	0.72	+0.1
4,847,509	-		SO4650	0.73	-0.4
4,847,509	-		SO4650	0.73	+0.0