Strain Fitness in Shewanella oneidensis MR-1 around SO4367

Experiment: Fusidic 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.125 mg/ml
4,561,511	-				+0.1
4,561,616	-				+0.6
4,561,734	+				+1.1
4,561,742	-				+0.2
4,561,760	+				+1.2
4,561,791	-				+0.5
4,562,021	+		SO4366	0.35	+0.4
4,562,034	+		SO4366	0.37	+0.0
4,562,034	+		SO4366	0.37	+0.5
4,562,034	+		SO4366	0.37	+0.8
4,562,034	+		SO4366	0.37	+1.0
4,562,034	+		SO4366	0.37	+1.5
4,562,042	-		SO4366	0.38	+1.0
4,562,042	-		SO4366	0.38	-1.2
4,562,042	-		SO4366	0.38	+1.0
4,562,071	+		SO4366	0.42	+0.9
4,562,085	+		SO4366	0.44	+0.9
4,562,101	+		SO4366	0.46	+1.3
4,562,109	-		SO4366	0.47	+0.6
4,562,109	-		SO4366	0.47	+1.4
4,562,115	-		SO4366	0.48	+0.8
4,562,175	+		SO4366	0.56	+1.7
4,562,175	+		SO4366	0.56	+0.1
4,562,305	+		SO4366	0.74	+0.6
4,562,313	-		SO4366	0.75	+1.8
4,562,338	+		SO4366	0.78	+0.6
4,562,390	+		SO4366	0.85	+1.4
4,562,408	-		SO4366	0.87	+1.0
4,562,408	-		SO4366	0.87	+0.5
4,562,418	-		SO4366	0.89	+0.3
4,562,459	-				+0.7
4,562,471	-				+1.3
4,562,484	+				+1.3
4,562,492	-				+1.1
4,562,492	-				-0.7
4,562,503	-				+0.2
4,562,508	+				+0.8
4,562,520	-				+1.2
4,562,522	+				+0.8
4,562,522	+				+1.4
4,562,522	+				+1.0
4,562,522	+				+0.5
4,562,522	+				+1.1
4,562,522	+				+0.8
4,562,530	-				+0.9
4,562,530	-				+0.3
4,562,530	-				+0.9
4,562,530	-				+0.9
4,562,541	-				+0.9
4,562,567	+				-0.8
4,562,611	+		SO4367	0.14	+0.5
4,562,652	-		SO4367	0.19	+0.2
4,562,674	+		SO4367	0.21	+1.2
4,562,679	+		SO4367	0.22	+0.9
4,562,692	-		SO4367	0.23	+0.5
4,562,755	-		SO4367	0.31	+0.7
4,562,816	+		SO4367	0.38	+0.8
4,562,843	-		SO4367	0.41	+0.5
4,562,926	+		SO4367	0.51	+0.9
4,562,926	+		SO4367	0.51	+1.0
4,562,928	+		SO4367	0.51	+0.9
4,562,934	-		SO4367	0.52	+0.8
4,562,936	-		SO4367	0.52	+1.0
4,562,936	-		SO4367	0.52	+1.0
4,562,986	+		SO4367	0.58	+1.5
4,563,002	-		SO4367	0.60	+0.3
4,563,183	+		SO4367	0.81	+1.2
4,563,228	+		SO4367	0.86	+0.2
4,563,246	+		SO4367	0.88	+0.8
4,563,451	-		SO4368	0.48	+1.0
4,563,513	+		SO4368	0.73	-0.3
4,563,518	+		SO4368	0.75	+0.8
4,563,537	-		SO4368	0.82	+1.3
4,563,575	+				+0.9
4,563,575	+				-0.2
4,563,583	-				+1.1
4,563,588	-				+1.4
4,563,592	+				+1.0
4,563,677	+		SO4369	0.34	+0.2
4,563,692	-		SO4369	0.40	+1.0
4,563,710	+		SO4369	0.47	+0.7
4,563,710	+		SO4369	0.47	+0.3
4,563,710	+		SO4369	0.47	-0.2
4,563,718	-		SO4369	0.51	+1.1
4,563,718	-		SO4369	0.51	+1.0
4,563,817	+				+1.4
4,563,817	+				+0.6
4,563,835	+				-0.0
4,563,858	-				+1.1
4,563,950	-		SO4370	0.20	+0.8
4,564,078	+		SO4370	0.43	+0.4
4,564,086	-		SO4370	0.45	+1.4
4,564,086	-		SO4370	0.45	+0.3
4,564,102	+		SO4370	0.48	+0.5
4,564,110	-		SO4370	0.49	+1.0
4,564,198	-		SO4370	0.65	+1.0
4,564,328	-		SO4370	0.89	+0.7