Strain Fitness in Shewanella oneidensis MR-1 around SO3847

Experiment: Fusidic 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.125 mg/ml
3,995,390	-				+0.5
3,995,473	+				+0.5
3,995,491	-		SO3846	0.12	+0.5
3,995,507	+		SO3846	0.14	-0.1
3,995,525	+		SO3846	0.17	+0.4
3,995,526	-		SO3846	0.17	+0.1
3,995,533	-		SO3846	0.18	-0.6
3,995,584	+		SO3846	0.24	-0.3
3,995,778	+		SO3846	0.49	+0.0
3,995,780	+		SO3846	0.49	+1.0
3,995,828	-		SO3846	0.55	-0.4
3,995,828	-		SO3846	0.55	-0.8
3,995,878	+		SO3846	0.61	-0.2
3,995,885	-		SO3846	0.62	+0.2
3,995,908	-		SO3846	0.65	-1.8
3,995,976	+		SO3846	0.74	+1.1
3,995,992	+		SO3846	0.76	-0.8
3,995,992	+		SO3846	0.76	+0.1
3,995,994	+		SO3846	0.76	+0.4
3,995,994	+		SO3846	0.76	-0.3
3,996,001	-		SO3846	0.77	+0.1
3,996,030	-		SO3846	0.81	+0.6
3,996,043	-		SO3846	0.82	+0.2
3,996,109	-				+0.4
3,996,132	-				-0.0
3,996,165	-				-1.3
3,996,290	+				+0.3
3,996,290	+				+0.3
3,996,312	+				+0.4
3,996,345	+				+0.1
3,996,345	+				+0.1
3,996,353	-				+1.1
3,996,460	-		SO3847	0.18	-0.7
3,996,535	+		SO3847	0.37	-0.9
3,996,552	+		SO3847	0.41	-1.2
3,996,693	-		SO3847	0.75	-0.8
3,996,840	-				+0.7
3,996,841	-				+0.4
3,996,878	+				+0.1
3,996,904	-		SO3848	0.13	-0.0
3,996,927	-		SO3848	0.18	+0.5
3,996,954	-		SO3848	0.23	-0.1
3,996,977	+		SO3848	0.28	-0.5
3,996,985	-		SO3848	0.29	+0.9
3,996,985	-		SO3848	0.29	+0.5
3,997,043	+		SO3848	0.41	+0.4
3,997,051	-		SO3848	0.43	-0.6
3,997,087	+		SO3848	0.50	+0.0
3,997,095	-		SO3848	0.51	+0.0
3,997,095	-		SO3848	0.51	+0.0
3,997,111	+		SO3848	0.54	+0.7
3,997,131	+		SO3848	0.58	-0.4
3,997,139	-		SO3848	0.60	+0.6
3,997,158	+		SO3848	0.64	+0.4
3,997,179	-		SO3848	0.68	-0.2
3,997,181	-		SO3848	0.68	+0.1
3,997,213	+		SO3848	0.75	+0.0
3,997,259	-		SO3848	0.84	+0.1
3,997,286	+		SO3848	0.89	+0.4
3,997,291	+				+0.9
3,997,299	-				+0.2
3,997,377	-				-0.1
3,997,403	+				+0.6
3,997,403	+				+0.1
3,997,403	+				+0.0
3,997,404	+				+0.1
3,997,411	-				-0.2
3,997,411	-				-1.5
3,997,411	-				+0.1
3,997,416	+				+0.2
3,997,416	-				-0.8
3,997,460	+				+0.0
3,997,531	-				+0.4
3,997,677	-				+0.1
3,997,677	-				-0.5
3,997,684	-				-0.4
3,997,771	-		SO3849	0.15	-0.1