Strain Fitness in Shewanella oneidensis MR-1 around SO2044

Experiment: Fusidic 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.125 mg/ml
2,141,206	-		SO2042	0.88	-0.9
2,141,305	-				-0.1
2,141,417	-				-0.1
2,141,496	+				+0.2
2,141,499	-				+0.7
2,141,504	-				+0.6
2,141,504	-				-0.5
2,141,555	+		SO2043	0.16	-1.5
2,141,588	-		SO2043	0.21	-0.5
2,141,640	-		SO2043	0.29	+0.0
2,141,650	-		SO2043	0.31	-0.3
2,141,690	-		SO2043	0.37	+0.2
2,141,694	+		SO2043	0.38	+0.5
2,141,701	+		SO2043	0.39	+0.3
2,141,702	-		SO2043	0.39	+0.3
2,141,702	-		SO2043	0.39	+0.1
2,141,713	+		SO2043	0.41	-0.4
2,141,737	+		SO2043	0.44	+0.3
2,141,917	-		SO2043	0.72	+0.4
2,141,931	-		SO2043	0.74	+0.4
2,141,988	+		SO2043	0.83	+0.5
2,141,989	+		SO2043	0.83	+0.5
2,142,001	-		SO2043	0.85	+0.4
2,142,033	-				+0.1
2,142,179	+				-0.1
2,142,192	+				+0.3
2,142,194	-				+0.3
2,142,197	+				-0.5
2,142,200	-				+0.1
2,142,206	-				+0.1
2,142,265	-	gloA	SO2044	0.17	-0.1
2,142,296	+	gloA	SO2044	0.25	-0.2
2,142,381	+	gloA	SO2044	0.45	-1.1
2,142,427	-	gloA	SO2044	0.56	-0.3
2,142,428	-	gloA	SO2044	0.57	+0.0
2,142,588	+				-0.3
2,142,594	-				-0.1
2,142,607	+				-0.1
2,142,607	+				+0.7
2,142,615	-				-0.2
2,142,615	-				-0.4
2,143,296	-				+0.7
2,143,298	-				-0.8
2,143,311	+				-0.2
2,143,388	-		SO2045	0.13	+1.2
2,143,450	+		SO2045	0.18	+0.3
2,143,549	+		SO2045	0.26	-0.5
2,143,557	-		SO2045	0.27	+0.1
2,143,562	-		SO2045	0.28	+0.9
2,143,565	+		SO2045	0.28	-0.0
2,143,583	-		SO2045	0.29	+0.1