Strain Fitness in Shewanella oneidensis MR-1 around SO1855

Experiment: Fusidic 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.125 mg/ml
1,946,580	+		SO1854	0.76	-2.9
1,946,588	-		SO1854	0.76	-4.2
1,946,588	-		SO1854	0.76	-3.9
1,946,588	-		SO1854	0.76	-4.2
1,946,886	+				-2.5
1,946,894	-				-4.2
1,946,910	+				-2.3
1,946,918	-				-2.7
1,946,920	+				-1.6
1,946,930	+				-3.5
1,946,930	+				-3.1
1,947,174	-				+0.1
1,947,285	+	rmf	SO1855	0.41	-0.3
1,947,292	+	rmf	SO1855	0.45	-0.4
1,947,338	-	rmf	SO1855	0.71	-0.9
1,947,420	-				-0.6
1,947,426	+				-1.3
1,947,434	-				-1.3
1,947,454	-				-0.6
1,947,495	+				+0.3
1,947,712	-	fabA	SO1856	0.42	+1.3
1,947,972	-				-0.1
1,948,064	-				-1.2
1,948,178	+				-1.8
1,948,178	+				-3.1
1,948,186	-				-2.4
1,948,186	-				-1.6
1,948,293	+		SO1857	0.12	-3.8
1,948,293	+		SO1857	0.12	-2.0
1,948,306	-		SO1857	0.13	-3.6
1,948,383	-		SO1857	0.17	-2.8