Strain Fitness in Shewanella oneidensis MR-1 around SO_4328

Experiment: Fusidic 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.125 mg/ml
4,520,554	+		SO4327.1	0.53	-3.3
4,520,605	+		SO4327.1	0.56	-2.2
4,520,744	-		SO4327.1	0.63	-2.1
4,520,798	-		SO4327.1	0.66	-2.0
4,520,868	+		SO4327.1	0.69	-3.6
4,520,868	+		SO4327.1	0.69	-1.8
4,520,876	-		SO4327.1	0.70	-3.9
4,520,894	-		SO4327.1	0.71	-4.1
4,520,908	-		SO4327.1	0.72	-4.0
4,520,999	+		SO4327.1	0.76	-2.6
4,521,007	-		SO4327.1	0.77	-2.8
4,521,007	-		SO4327.1	0.77	-2.0
4,521,026	+		SO4327.1	0.78	-3.0
4,521,183	+		SO4327.1	0.86	-3.7
4,521,186	-		SO4327.1	0.86	-3.7
4,521,280	-				-4.1
4,521,289	-				-3.0
4,521,316	+				-2.3
4,521,324	-				-2.3
4,521,324	-				-2.6
4,521,356	+				-2.2
4,521,376	-				-4.6
4,521,396	+				-3.2
4,521,482	-				-3.5
4,521,498	-				-3.9
4,521,517	-				-2.2
4,521,552	-		SO_4328	0.10	-2.7
4,521,691	+		SO_4328	0.22	-2.8
4,521,718	+		SO_4328	0.24	-3.7
4,521,726	-		SO_4328	0.25	-2.8
4,521,805	+		SO_4328	0.31	-2.5
4,521,909	+		SO_4328	0.40	-1.2
4,521,978	+		SO_4328	0.45	-2.9
4,521,986	-		SO_4328	0.46	-3.1
4,522,162	+		SO_4328	0.60	-2.4
4,522,242	+		SO_4328	0.67	-3.7
4,522,320	+		SO_4328	0.73	-2.9
4,522,367	+		SO_4328	0.77	-2.6
4,522,367	+		SO_4328	0.77	-3.6
4,522,367	+		SO_4328	0.77	-2.2
4,522,493	+		SO_4328	0.87	-2.7
4,522,632	+				-1.6
4,522,685	-				-1.8
4,523,107	+				-0.1
4,523,107	+				+0.3
4,523,107	+				-0.6
4,523,115	-				-0.3
4,523,115	-				-2.0
4,523,115	-				+0.2
4,523,115	-				-0.4
4,523,115	-				+0.2
4,523,115	-				-0.0
4,523,202	+				+0.2
4,523,216	+				-1.3
4,523,224	-		SO4330	0.11	-0.3
4,523,226	+		SO4330	0.12	+0.9
4,523,256	+		SO4330	0.21	+0.5
4,523,256	+		SO4330	0.21	-0.3
4,523,256	+		SO4330	0.21	+0.7
4,523,304	+		SO4330	0.35	-0.5
4,523,304	+		SO4330	0.35	-0.0
4,523,304	+		SO4330	0.35	+0.1
4,523,320	-		SO4330	0.40	-0.5
4,523,333	+		SO4330	0.44	+0.3
4,523,538	+				-1.2
4,523,566	+				+0.1
4,523,609	-				+0.6