Strain Fitness in Shewanella oneidensis MR-1 around SO_1527
Experiment: Fusidic 0.125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Fusidic 0.125 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,604,042 | + | SO_1527 | 0.38 | -1.4 | |
1,604,129 | - | SO_1527 | 0.73 | -2.1 | |
1,604,208 | + | -0.6 | |||
1,604,235 | - | +0.6 | |||
1,604,347 | - | +0.4 | |||
1,604,417 | + | -2.1 | |||
1,604,419 | - | -0.2 | |||
1,604,431 | + | -0.1 | |||
1,604,431 | + | -0.3 | |||
1,604,439 | - | -0.2 | |||
1,604,482 | - | -0.7 | |||
1,604,553 | - | +0.1 | |||
1,604,573 | + | +1.6 | |||
1,604,735 | - | pomA | SO1529 | 0.29 | +1.1 |
1,604,901 | - | pomA | SO1529 | 0.51 | +1.0 |
Or see this region's nucleotide sequence