Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c09930

Experiment: m.b. Gentamicin 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Gentamicin 0.002 mg/ml
1,025,984	+				+0.4
1,026,037	+				+0.7
1,026,053	+				+0.3
1,026,096	+				-1.2
1,026,119	+				-0.9
1,026,129	+				-0.5
1,026,142	+				-0.0
1,026,171	+		PGA1_c09920	0.11	-0.2
1,026,173	+		PGA1_c09920	0.11	+0.2
1,026,190	+		PGA1_c09920	0.13	-2.2
1,026,198	+		PGA1_c09920	0.14	+0.8
1,026,216	-		PGA1_c09920	0.16	-0.3
1,026,218	+		PGA1_c09920	0.17	+1.0
1,026,241	+		PGA1_c09920	0.20	+0.4
1,026,241	+		PGA1_c09920	0.20	-0.9
1,026,249	-		PGA1_c09920	0.21	+0.4
1,026,249	-		PGA1_c09920	0.21	-0.6
1,026,431	+		PGA1_c09920	0.44	-0.0
1,026,575	-		PGA1_c09920	0.62	-0.4
1,026,597	-		PGA1_c09920	0.65	-1.9
1,026,609	+		PGA1_c09920	0.67	-2.0
1,026,664	-		PGA1_c09920	0.74	-1.6
1,026,733	-		PGA1_c09920	0.83	+0.2
1,026,739	+		PGA1_c09920	0.83	+0.2
1,026,814	+				+1.0
1,026,850	-				+0.4
1,026,850	-				-0.9
1,026,878	-				+1.0
1,027,020	-				-0.2
1,027,065	-				+1.5
1,027,065	-				+0.1
1,027,166	+		PGA1_c09930	0.10	+0.1
1,027,184	-		PGA1_c09930	0.11	+0.3
1,027,184	-		PGA1_c09930	0.11	+0.0
1,027,200	-		PGA1_c09930	0.12	-1.2
1,027,207	-		PGA1_c09930	0.12	-0.0
1,027,255	+		PGA1_c09930	0.14	-0.5
1,027,263	-		PGA1_c09930	0.15	+1.4
1,027,291	+		PGA1_c09930	0.16	-0.9
1,027,329	-		PGA1_c09930	0.17	+1.0
1,027,338	+		PGA1_c09930	0.18	+0.1
1,027,345	+		PGA1_c09930	0.18	+0.4
1,027,353	-		PGA1_c09930	0.19	+2.2
1,027,459	-		PGA1_c09930	0.23	+0.5
1,027,516	+		PGA1_c09930	0.26	+0.7
1,027,561	+		PGA1_c09930	0.28	+0.4
1,027,584	-		PGA1_c09930	0.29	-0.9
1,027,591	-		PGA1_c09930	0.29	+0.6
1,027,757	+		PGA1_c09930	0.37	-2.5
1,027,775	-		PGA1_c09930	0.37	-0.9
1,027,777	-		PGA1_c09930	0.37	+0.7
1,027,836	-		PGA1_c09930	0.40	+1.1
1,027,889	+		PGA1_c09930	0.42	-1.1
1,027,897	-		PGA1_c09930	0.43	-0.7
1,027,929	+		PGA1_c09930	0.44	-0.0
1,027,937	-		PGA1_c09930	0.45	+0.2
1,027,937	-		PGA1_c09930	0.45	+1.1
1,027,959	+		PGA1_c09930	0.46	-0.6
1,027,969	+		PGA1_c09930	0.46	+0.4
1,027,992	+		PGA1_c09930	0.47	+1.1
1,028,067	+		PGA1_c09930	0.50	+0.2
1,028,080	-		PGA1_c09930	0.51	+0.8
1,028,137	+		PGA1_c09930	0.54	+0.3
1,028,181	+		PGA1_c09930	0.56	-0.0
1,028,225	-		PGA1_c09930	0.57	-0.4
1,028,248	-		PGA1_c09930	0.59	+0.4
1,028,272	+		PGA1_c09930	0.60	-0.1
1,028,296	-		PGA1_c09930	0.61	+0.6
1,028,304	-		PGA1_c09930	0.61	-1.6
1,028,350	+		PGA1_c09930	0.63	-0.3
1,028,358	-		PGA1_c09930	0.63	+0.8
1,028,465	-		PGA1_c09930	0.68	+0.4
1,028,521	+		PGA1_c09930	0.71	+0.4
1,028,633	+		PGA1_c09930	0.76	-2.3
1,028,641	-		PGA1_c09930	0.76	+1.3
1,028,641	-		PGA1_c09930	0.76	+1.6
1,028,839	+		PGA1_c09930	0.85	+0.1
1,028,850	+		PGA1_c09930	0.85	+1.6
1,028,858	-		PGA1_c09930	0.86	-1.6
1,028,886	-		PGA1_c09930	0.87	+0.8
1,028,896	+		PGA1_c09930	0.87	+0.4
1,028,896	-		PGA1_c09930	0.87	+0.9
1,028,987	-				+0.3
1,028,990	+				+0.3
1,029,000	+				-0.3
1,029,032	+				+1.5
1,029,034	+				+0.9
1,029,260	+		PGA1_c09950	0.17	+0.6
1,029,303	-		PGA1_c09950	0.26	+0.2
1,029,340	-		PGA1_c09950	0.34	-0.5
1,029,355	-		PGA1_c09950	0.37	-0.0
1,029,378	+		PGA1_c09950	0.42	-1.6
1,029,378	+		PGA1_c09950	0.42	-0.8
1,029,400	+		PGA1_c09950	0.47	+0.8
1,029,422	-		PGA1_c09950	0.52	+0.6
1,029,424	+		PGA1_c09950	0.52	+1.1
1,029,474	-		PGA1_c09950	0.63	+0.3
1,029,601	+				+0.1
1,029,629	-				+0.3
1,029,910	+		PGA1_c09960	0.28	+1.8
1,029,917	+		PGA1_c09960	0.29	+0.6
1,029,945	+		PGA1_c09960	0.34	-2.3
1,029,965	+		PGA1_c09960	0.38	-1.0
1,029,981	-		PGA1_c09960	0.40	+0.3
1,030,123	-		PGA1_c09960	0.65	+2.1