Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c33570

Experiment: m.b. Gentamicin 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Gentamicin 0.002 mg/ml
3,517,189	-		PGA1_c33560	0.43	+0.2
3,517,240	-		PGA1_c33560	0.46	+0.0
3,517,249	+		PGA1_c33560	0.47	+1.0
3,517,274	-		PGA1_c33560	0.49	+1.9
3,517,283	-		PGA1_c33560	0.49	-0.7
3,517,298	+		PGA1_c33560	0.51	-0.4
3,517,306	-		PGA1_c33560	0.51	+0.6
3,517,341	-		PGA1_c33560	0.54	+0.0
3,517,433	+		PGA1_c33560	0.60	-0.2
3,517,502	-		PGA1_c33560	0.65	+1.2
3,517,517	+		PGA1_c33560	0.66	-0.4
3,517,517	+		PGA1_c33560	0.66	-2.1
3,517,517	+		PGA1_c33560	0.66	-0.1
3,517,517	+		PGA1_c33560	0.66	+0.8
3,517,525	-		PGA1_c33560	0.67	+0.8
3,517,533	-		PGA1_c33560	0.67	+0.2
3,517,560	+		PGA1_c33560	0.69	-0.2
3,517,573	-		PGA1_c33560	0.70	+0.8
3,517,635	+		PGA1_c33560	0.74	+0.2
3,517,742	-		PGA1_c33560	0.82	+0.0
3,517,796	+		PGA1_c33560	0.86	-0.2
3,517,804	-		PGA1_c33560	0.86	-1.8
3,517,887	+				+0.0
3,517,921	+				+0.6
3,517,929	-				-0.9
3,517,966	-				-0.7
3,517,992	+				+0.3
3,517,992	+				-1.8
3,518,000	-				-0.7
3,518,062	-				+0.8
3,518,107	+				-0.5
3,518,113	+				+0.2
3,519,391	-				+1.2
3,519,421	-				+1.0
3,519,449	+				-0.7
3,519,449	+				+0.3
3,519,449	+				+0.3
3,519,449	+				+0.6
3,519,449	+				+0.3
3,519,449	+				+0.7
3,519,449	+				+1.1
3,519,449	+				+0.5
3,519,449	+				-0.7
3,519,449	+				-0.7
3,519,449	+				+0.3
3,519,449	+				-0.3
3,519,449	+				-0.3
3,519,449	+				-0.3
3,519,449	+				+1.6
3,519,449	+				-2.7
3,519,449	+				-0.7
3,519,449	+				-0.2
3,519,449	+				-0.4
3,519,449	+				+1.1
3,519,449	+				+1.6
3,519,457	-		PGA1_c33580	0.11	+0.7
3,519,457	-		PGA1_c33580	0.11	-0.8
3,519,457	-		PGA1_c33580	0.11	+1.2
3,519,457	-		PGA1_c33580	0.11	-3.1
3,519,457	-		PGA1_c33580	0.11	+0.8
3,519,457	-		PGA1_c33580	0.11	-0.8
3,519,457	-		PGA1_c33580	0.11	+1.7
3,519,457	-		PGA1_c33580	0.11	+1.8
3,519,457	-		PGA1_c33580	0.11	+1.4
3,519,457	-		PGA1_c33580	0.11	-1.7
3,519,457	-		PGA1_c33580	0.11	+1.5
3,519,457	-		PGA1_c33580	0.11	+0.0
3,519,457	-		PGA1_c33580	0.11	+1.5
3,519,457	-		PGA1_c33580	0.11	+0.9
3,519,457	-		PGA1_c33580	0.11	+1.4
3,519,457	-		PGA1_c33580	0.11	+0.8
3,519,457	-		PGA1_c33580	0.11	-0.7
3,519,457	-		PGA1_c33580	0.11	-2.5
3,519,457	-		PGA1_c33580	0.11	+1.5
3,519,457	-		PGA1_c33580	0.11	-0.5
3,519,457	-		PGA1_c33580	0.11	+1.6
3,519,457	-		PGA1_c33580	0.11	+1.2
3,519,457	-		PGA1_c33580	0.11	+0.7
3,519,457	-		PGA1_c33580	0.11	-0.1
3,519,459	+		PGA1_c33580	0.11	-0.0
3,519,467	-		PGA1_c33580	0.12	+2.5
3,519,510	+		PGA1_c33580	0.19	+1.1
3,519,514	-		PGA1_c33580	0.20	-0.1
3,519,598	+		PGA1_c33580	0.34	-0.3
3,519,598	+		PGA1_c33580	0.34	-0.2
3,519,618	-		PGA1_c33580	0.37	-1.0
3,519,651	-		PGA1_c33580	0.42	+0.6
3,519,756	+		PGA1_c33580	0.59	+0.8
3,519,778	+		PGA1_c33580	0.63	+1.3
3,519,786	-		PGA1_c33580	0.64	-1.4
3,519,817	-		PGA1_c33580	0.69	-0.5
3,519,906	-		PGA1_c33580	0.83	+1.0
3,519,925	+		PGA1_c33580	0.87	-1.1
3,519,944	-		PGA1_c33580	0.90	+0.2
3,519,951	-				-0.5
3,519,959	+				-1.7
3,519,973	-				+0.6
3,519,980	+				-0.9
3,520,008	+				-0.2
3,520,008	+				-1.1
3,520,008	+				+1.0
3,520,008	+				-0.2
3,520,010	-				+0.8
3,520,016	-				+0.6
3,520,016	-				+1.5
3,520,016	-				+3.3
3,520,016	-				-1.4
3,520,024	+				+1.5
3,520,032	-				-0.1
3,520,060	-				+0.5
3,520,085	+				+1.0
3,520,085	+				+0.9
3,520,085	+				+0.6
3,520,093	-				-3.1
3,520,093	-				+0.0
3,520,093	-				+1.3
3,520,093	-				-0.5
3,520,093	-				+0.4
3,520,093	-				-0.2
3,520,093	-				+0.8
3,520,136	+				+0.1
3,520,146	-				+0.2
3,520,198	-		PGA1_c33590	0.16	+0.1
3,520,210	+		PGA1_c33590	0.19	-0.1
3,520,231	+		PGA1_c33590	0.23	-2.1