Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c32020

Experiment: m.b. Gentamicin 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Gentamicin 0.002 mg/ml
3,354,793	+		PGA1_c32000	0.87	-0.0
3,354,801	-		PGA1_c32000	0.88	-0.3
3,354,801	-		PGA1_c32000	0.88	-0.5
3,354,815	-				+1.3
3,354,819	+				-0.0
3,354,853	+				-2.6
3,354,861	-				+0.1
3,354,884	-				-1.0
3,354,884	-				-0.4
3,354,945	-				-1.5
3,354,945	-				+0.1
3,354,946	-				-1.8
3,355,031	-				+1.1
3,355,039	-				-0.2
3,355,050	-				+0.5
3,355,088	+				+0.8
3,355,089	+				-0.8
3,355,182	-		PGA1_c32010	0.13	+1.0
3,355,182	-		PGA1_c32010	0.13	-1.8
3,355,193	+		PGA1_c32010	0.15	+0.4
3,355,193	+		PGA1_c32010	0.15	-1.1
3,355,284	-		PGA1_c32010	0.31	-0.4
3,355,373	+		PGA1_c32010	0.47	+1.1
3,355,460	+		PGA1_c32010	0.63	-1.2
3,355,470	-		PGA1_c32010	0.65	+0.7
3,355,495	+		PGA1_c32010	0.70	-0.0
3,355,524	+		PGA1_c32010	0.75	+0.4
3,355,530	-		PGA1_c32010	0.76	-1.0
3,355,556	+		PGA1_c32010	0.81	+1.6
3,355,559	-		PGA1_c32010	0.81	-1.4
3,355,583	+		PGA1_c32010	0.86	+0.7
3,355,584	+		PGA1_c32010	0.86	-1.0
3,355,624	+				+0.1
3,355,629	+				+1.7
3,355,639	-				-2.0
3,355,725	-				-2.0
3,355,810	+				-1.4
3,355,810	+				-1.0
3,355,810	+				-0.3
3,355,810	+				-1.2
3,355,818	-				+0.2
3,355,818	-				+1.2
3,355,818	-				+0.2
3,355,818	-				-0.0
3,355,818	-				+1.1
3,355,818	-				-1.4
3,355,818	-				-0.5
3,355,818	-				-0.3
3,355,818	-				+1.3
3,355,838	-				+0.2
3,355,931	-		PGA1_c32020	0.13	-1.0
3,355,984	+		PGA1_c32020	0.18	+2.3
3,356,002	-		PGA1_c32020	0.19	-0.5
3,356,002	-		PGA1_c32020	0.19	-0.0
3,356,002	-		PGA1_c32020	0.19	-0.4
3,356,023	-		PGA1_c32020	0.21	+1.4
3,356,034	+		PGA1_c32020	0.21	+1.3
3,356,034	+		PGA1_c32020	0.21	+1.0
3,356,042	-		PGA1_c32020	0.22	+1.6
3,356,042	-		PGA1_c32020	0.22	-1.4
3,356,042	-		PGA1_c32020	0.22	+0.2
3,356,068	-		PGA1_c32020	0.24	+1.8
3,356,126	+		PGA1_c32020	0.29	-0.5
3,356,131	-		PGA1_c32020	0.29	-0.8
3,356,156	-		PGA1_c32020	0.31	-0.8
3,356,216	+		PGA1_c32020	0.36	+1.0
3,356,253	+		PGA1_c32020	0.39	+0.1
3,356,276	-		PGA1_c32020	0.41	+1.0
3,356,311	+		PGA1_c32020	0.44	-0.0
3,356,429	+		PGA1_c32020	0.53	+0.4
3,356,481	+		PGA1_c32020	0.57	+2.2
3,356,481	+		PGA1_c32020	0.57	+1.3
3,356,489	-		PGA1_c32020	0.58	-0.9
3,356,489	-		PGA1_c32020	0.58	+1.0
3,356,504	-		PGA1_c32020	0.59	-0.0
3,356,564	+		PGA1_c32020	0.64	+0.1
3,356,564	+		PGA1_c32020	0.64	+0.3
3,356,630	+		PGA1_c32020	0.69	-0.3
3,356,644	+		PGA1_c32020	0.70	+0.4
3,356,644	+		PGA1_c32020	0.70	+0.5
3,356,728	-		PGA1_c32020	0.77	-0.8
3,356,757	+		PGA1_c32020	0.79	+0.3
3,356,765	-		PGA1_c32020	0.80	+2.3
3,356,804	-		PGA1_c32020	0.83	+0.2
3,356,829	+		PGA1_c32020	0.85	+0.1
3,356,843	-		PGA1_c32020	0.86	-1.0
3,356,858	+		PGA1_c32020	0.87	+0.5
3,356,859	+		PGA1_c32020	0.87	+0.4
3,356,899	+				+0.3
3,356,912	+				-1.6
3,356,920	-				+0.5
3,356,920	-				+3.0
3,356,920	-				-1.0
3,356,920	-				-0.2
3,356,962	+				-1.2
3,356,984	+				+1.0
3,357,063	+				+0.0
3,357,069	-				-0.0
3,357,069	-				+1.8
3,357,079	-				+0.1
3,357,079	-				+0.1
3,357,091	-				+0.4
3,357,091	-				+0.7
3,357,091	-				+0.5
3,357,091	-				+1.0
3,357,122	-				-0.2
3,357,173	+				+0.1
3,357,210	+				-0.8
3,357,240	-				-0.6
3,357,244	-				+1.0
3,357,267	+				-1.2
3,357,342	+		PGA1_c32030	0.14	-0.3
3,357,350	-		PGA1_c32030	0.15	-0.0
3,357,362	+		PGA1_c32030	0.15	-0.2
3,357,373	-		PGA1_c32030	0.16	-1.4
3,357,380	-		PGA1_c32030	0.17	+0.3
3,357,417	-		PGA1_c32030	0.19	-0.1
3,357,418	+		PGA1_c32030	0.19	-2.0
3,357,427	-		PGA1_c32030	0.20	-0.3
3,357,427	-		PGA1_c32030	0.20	-0.4
3,357,427	-		PGA1_c32030	0.20	-0.4
3,357,455	-		PGA1_c32030	0.22	+1.0
3,357,482	+		PGA1_c32030	0.23	-2.2
3,357,482	+		PGA1_c32030	0.23	+0.1
3,357,490	-		PGA1_c32030	0.24	-0.5
3,357,490	-		PGA1_c32030	0.24	+1.3
3,357,664	+		PGA1_c32030	0.36	-0.5
3,357,739	-		PGA1_c32030	0.41	+1.7
3,357,804	+		PGA1_c32030	0.45	-1.8
3,357,804	+		PGA1_c32030	0.45	+0.4
3,357,804	+		PGA1_c32030	0.45	-0.6
3,357,812	-		PGA1_c32030	0.46	-2.5
3,357,812	-		PGA1_c32030	0.46	-0.5
3,357,822	-		PGA1_c32030	0.46	+0.8
3,357,869	-		PGA1_c32030	0.49	-0.0
3,357,950	+		PGA1_c32030	0.55	+1.4
3,357,968	+		PGA1_c32030	0.56	-1.0
3,357,968	+		PGA1_c32030	0.56	-1.3