Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c28500

Experiment: m.b. Gentamicin 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Gentamicin 0.002 mg/ml
2,985,887	+				-0.2
2,985,908	-				+2.4
2,985,939	-				+0.8
2,985,939	-				-0.2
2,985,942	+				-0.2
2,986,142	+				+2.0
2,986,142	+				-1.1
2,986,207	-				+0.5
2,986,215	-				+2.4
2,986,219	+				+2.2
2,986,222	-				+0.2
2,986,227	-				-1.5
2,986,326	-				-1.4
2,986,364	+				+2.3
2,986,364	-				+0.8
2,986,364	-				-1.5
2,986,371	+				+1.2
2,986,383	+				-0.8
2,986,383	+				+0.2
2,986,396	-				+0.2
2,986,418	+				-0.0
2,986,418	+				-0.2
2,986,426	-				-0.2
2,986,426	-				+0.8
2,986,426	-				-0.8
2,986,431	-				+1.2
2,986,512	-				+2.0
2,986,512	-				+0.2
2,986,537	-				+1.4
2,986,567	+				-0.8
2,986,567	+				-1.2
2,986,576	+				-1.3
2,986,578	+				-2.2
2,986,649	+				+1.2
2,986,651	+				-0.2
2,986,656	+				-0.1
2,986,656	+				-1.8
2,986,661	+				+0.8
2,986,661	+				-0.9
2,986,661	+				+0.8
2,986,669	-				+1.8
2,986,669	-				+1.8
2,986,669	-				+2.4
2,986,688	+				+1.5
2,986,702	+				-0.5
2,986,707	+				-0.2
2,986,726	+				-0.9
2,986,731	+				+1.5
2,986,734	+				+1.1
2,986,770	-				+1.8
2,986,807	+				+2.5
2,986,807	+				-1.3
2,986,812	+				+0.5
2,986,837	+		PGA1_c28500	0.13	+0.6
2,986,856	+		PGA1_c28500	0.19	+0.2
2,986,864	-		PGA1_c28500	0.22	-0.2
2,986,864	-		PGA1_c28500	0.22	-0.2
2,986,897	+		PGA1_c28500	0.32	-0.2
2,986,905	-				+0.8
2,986,905	-		PGA1_c28500	0.35	+0.8
2,986,921	-		PGA1_c28500	0.40	+1.8
2,986,939	+		PGA1_c28500	0.46	-0.3
2,986,948	-		PGA1_c28500	0.49	+1.2
2,986,974	+		PGA1_c28500	0.57	+2.1
2,986,983	+		PGA1_c28500	0.60	+1.8
2,986,983	-		PGA1_c28500	0.60	-0.8
2,987,028	-		PGA1_c28500	0.74	+0.8
2,987,030	+		PGA1_c28500	0.75	-1.2
2,987,071	+		PGA1_c28500	0.88	-0.1
2,987,071	+		PGA1_c28500	0.88	+1.6
2,987,074	-		PGA1_c28500	0.89	-0.5
2,987,074	-		PGA1_c28500	0.89	+2.5
2,987,079	-				+1.8
2,987,079	-				+0.2
2,987,084	+				+1.6
2,987,084	+				+1.2
2,987,084	+				-0.4
2,987,084	+				+0.5
2,987,089	-				+1.1
2,987,092	-				+0.4
2,987,092	-				-1.4
2,987,092	-				+1.4
2,987,092	-				-0.2
2,987,092	-				+1.8
2,987,092	-				+0.5
2,987,092	-				-0.2
2,987,092	-				-1.8
2,987,092	-				+2.4
2,987,092	-				+0.1
2,987,094	-				+2.0
2,987,094	-				+1.1
2,987,101	+				+0.4
2,987,177	+				-0.5
2,987,185	-				+0.8
2,987,188	+		PGA1_c28510	0.10	+0.2
2,987,196	-		PGA1_c28510	0.11	-1.2
2,987,207	+		PGA1_c28510	0.12	-0.1
2,987,208	+		PGA1_c28510	0.13	+1.2
2,987,240	+		PGA1_c28510	0.16	+0.5
2,987,245	+		PGA1_c28510	0.17	-0.8
2,987,251	+		PGA1_c28510	0.18	-1.8
2,987,253	-		PGA1_c28510	0.18	+2.4
2,987,253	-		PGA1_c28510	0.18	+0.2
2,987,253	-		PGA1_c28510	0.18	-0.6
2,987,401	+		PGA1_c28510	0.36	+0.4
2,987,408	-		PGA1_c28510	0.37	-0.2
2,987,423	-		PGA1_c28510	0.38	-0.2
2,987,438	+		PGA1_c28510	0.40	+0.1
2,987,443	+		PGA1_c28510	0.41	+0.7
2,987,448	+		PGA1_c28510	0.41	-0.5
2,987,451	-		PGA1_c28510	0.42	+0.8
2,987,451	-		PGA1_c28510	0.42	-0.2
2,987,456	-		PGA1_c28510	0.42	+0.1
2,987,474	+		PGA1_c28510	0.45	-0.6
2,987,532	+		PGA1_c28510	0.52	+0.4
2,987,533	+		PGA1_c28510	0.52	+0.6
2,987,533	+		PGA1_c28510	0.52	+1.8
2,987,533	+		PGA1_c28510	0.52	+2.6
2,987,533	+		PGA1_c28510	0.52	-2.0
2,987,541	-		PGA1_c28510	0.53	+0.8
2,987,541	-		PGA1_c28510	0.53	+0.8
2,987,541	-		PGA1_c28510	0.53	-0.6
2,987,541	-		PGA1_c28510	0.53	+1.3
2,987,541	-		PGA1_c28510	0.53	+0.5
2,987,546	-		PGA1_c28510	0.53	-1.5
2,987,559	+		PGA1_c28510	0.55	-0.8
2,987,567	-		PGA1_c28510	0.56	-0.8
2,987,577	+		PGA1_c28510	0.57	+0.5
2,987,618	-		PGA1_c28510	0.62	-0.2
2,987,635	+		PGA1_c28510	0.64	+0.5
2,987,635	+		PGA1_c28510	0.64	+1.8
2,987,635	+		PGA1_c28510	0.64	+0.2
2,987,635	+		PGA1_c28510	0.64	+0.8
2,987,635	+		PGA1_c28510	0.64	+0.7
2,987,635	+		PGA1_c28510	0.64	-0.7
2,987,643	-		PGA1_c28510	0.65	-1.2
2,987,643	-		PGA1_c28510	0.65	-0.2
2,987,643	-		PGA1_c28510	0.65	-0.3
2,987,643	-		PGA1_c28510	0.65	+0.4
2,987,643	-		PGA1_c28510	0.65	+3.1
2,987,643	-		PGA1_c28510	0.65	-1.5
2,987,643	-		PGA1_c28510	0.65	-0.5
2,987,643	-		PGA1_c28510	0.65	+0.8
2,987,643	-		PGA1_c28510	0.65	+1.8
2,987,643	-		PGA1_c28510	0.65	-1.8
2,987,649	+		PGA1_c28510	0.66	+0.8
2,987,656	+		PGA1_c28510	0.66	-0.4
2,987,679	+		PGA1_c28510	0.69	-0.2
2,987,702	+		PGA1_c28510	0.72	-1.4
2,987,717	-		PGA1_c28510	0.74	-0.4
2,987,717	-		PGA1_c28510	0.74	+0.8
2,987,730	-		PGA1_c28510	0.75	-0.2
2,987,740	+		PGA1_c28510	0.77	+0.5
2,987,741	-		PGA1_c28510	0.77	-2.2
2,987,748	+		PGA1_c28510	0.77	+1.3
2,987,775	+		PGA1_c28510	0.81	-0.7
2,987,780	+		PGA1_c28510	0.81	-1.6
2,987,783	-		PGA1_c28510	0.82	+0.8
2,987,799	+		PGA1_c28510	0.84	+1.5
2,987,799	-		PGA1_c28510	0.84	+1.4
2,987,831	-		PGA1_c28510	0.87	+0.2
2,987,839	+		PGA1_c28510	0.88	-0.1
2,987,857	-				-0.4
2,987,857	-				+0.8
2,987,862	-				+2.2
2,987,905	-				-1.8
2,987,912	+				-1.2
2,987,927	+				-2.0
2,987,927	+				-1.4
2,987,929	+				+0.1
2,987,962	+				-0.8
2,987,962	+				+1.2
2,987,962	+				-0.2
2,987,962	+				+0.1
2,987,962	+				-1.0
2,987,962	+				+1.6
2,987,962	+				-0.4
2,987,962	+				+0.8
2,987,962	+				-0.7
2,987,962	+				+0.5
2,987,962	+				+0.8
2,987,970	-				-0.2
2,987,970	-				+0.5
2,987,970	-				+0.6
2,987,970	-				-0.2
2,987,970	-				-2.2
2,987,970	-				-1.0
2,987,970	-				+1.5
2,987,970	-				+0.8
2,987,970	-				+1.0
2,987,970	-				+0.3
2,987,970	-				-0.4
2,987,970	-				+1.6
2,987,980	-				-0.8
2,987,991	+				-0.2
2,987,991	+				+0.2
2,987,991	-				+0.3
2,988,048	-				-0.5
2,988,057	+				+1.0
2,988,057	+				+0.3
2,988,058	+		PGA1_c28520	0.10	+0.3
2,988,058	+		PGA1_c28520	0.10	+0.1
2,988,058	+		PGA1_c28520	0.10	+0.8
2,988,065	-		PGA1_c28520	0.11	+0.7
2,988,066	-		PGA1_c28520	0.11	+0.5
2,988,069	+		PGA1_c28520	0.12	-1.8
2,988,069	+		PGA1_c28520	0.12	+0.2
2,988,069	+		PGA1_c28520	0.12	+0.0
2,988,071	-		PGA1_c28520	0.12	+0.8
2,988,074	+		PGA1_c28520	0.13	-0.2
2,988,074	+		PGA1_c28520	0.13	+0.8
2,988,076	+		PGA1_c28520	0.13	-0.8
2,988,077	-		PGA1_c28520	0.13	+0.8
2,988,083	-		PGA1_c28520	0.14	+0.4
2,988,083	-		PGA1_c28520	0.14	+1.5
2,988,104	+		PGA1_c28520	0.18	+0.8
2,988,104	-		PGA1_c28520	0.18	-0.2