Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c23240

Experiment: m.b. Gentamicin 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Gentamicin 0.002 mg/ml
2,410,899	-				-0.5
2,410,910	+				-0.2
2,410,920	+				-0.5
2,410,927	+				+0.5
2,410,927	+				+1.1
2,410,927	+				-0.7
2,410,927	+				-1.0
2,410,927	+				+0.5
2,410,927	+				-1.1
2,410,927	+				+0.5
2,410,927	+				-0.7
2,410,927	+				+1.4
2,410,927	+				-1.2
2,410,927	+				+1.3
2,410,927	+				-0.0
2,410,927	+				+0.6
2,410,927	+				-1.6
2,410,927	+				+0.2
2,410,927	+				-0.8
2,410,927	+				+0.3
2,410,927	+				+1.2
2,410,927	+				-0.5
2,410,928	-				+0.6
2,410,928	-				+0.2
2,410,935	-				+0.3
2,410,935	-				-1.5
2,410,935	-				+0.5
2,410,935	-				+0.3
2,410,935	-				+0.6
2,410,935	-				+1.8
2,410,935	-				-0.1
2,410,935	-				+0.3
2,410,935	-				+0.1
2,410,935	-				-0.9
2,410,935	-				+1.1
2,410,935	-				-2.7
2,410,935	-				+0.7
2,410,935	-				-0.0
2,410,935	-				-0.8
2,410,935	-				+0.1
2,410,935	-				+1.3
2,410,935	-				-0.6
2,410,935	-				+0.1
2,410,935	-				+0.5
2,410,936	-				-0.6
2,410,939	+				+0.2
2,410,939	+				-0.6
2,410,939	+				+0.8
2,410,947	-				-0.8
2,410,947	-				-1.0
2,410,947	-				-2.8
2,410,947	-				+0.6
2,410,947	-				-1.8
2,410,964	+				-0.1
2,410,969	+				-2.0
2,410,969	+				-0.6
2,410,969	+				-0.6
2,410,969	+				-0.9
2,410,969	+				-0.1
2,410,969	+				-0.7
2,410,969	+				+0.5
2,410,969	+				+0.2
2,410,969	+				+0.2
2,410,969	+				-0.6
2,410,969	+				+0.3
2,410,969	+				+0.3
2,410,969	+				+0.8
2,410,969	+				-0.1
2,410,969	+				-1.1
2,410,969	+				+0.5
2,410,969	+				+0.1
2,410,969	+				-0.5
2,410,969	+				+0.1
2,410,969	+				-2.2
2,410,969	+				-1.0
2,410,969	+				+1.6
2,410,969	+				-0.7
2,410,969	+				-0.5
2,410,969	+				+0.0
2,410,969	+				+1.2
2,410,969	+				-1.0
2,410,969	+				+0.7
2,410,969	+				+1.8
2,410,969	+				-1.0
2,410,969	+				+0.0
2,410,969	+				+0.8
2,410,969	+				+0.7
2,410,969	+				+2.2
2,410,969	+				-0.8
2,410,969	+				-0.2
2,410,969	+				+0.7
2,410,969	+				-0.3
2,410,969	+				-0.8
2,410,969	+				+0.8
2,410,969	+				+0.4
2,410,969	+				+0.8
2,410,972	-				+0.1
2,410,974	+				-0.7
2,410,974	+				+0.8
2,410,974	+				-0.3
2,410,974	+				+0.4
2,410,974	+				-1.6
2,410,974	+				+0.1
2,410,977	-				+0.4
2,410,977	-				+0.3
2,410,977	-				+1.5
2,410,977	-				+0.2
2,410,977	-				+1.8
2,410,977	-				+0.2
2,410,977	-				-0.5
2,410,977	-				-1.8
2,410,977	-				-1.0
2,410,977	-				+0.2
2,410,977	-				+0.2
2,410,977	-				+0.6
2,410,977	-				+0.1
2,410,977	-				+0.1
2,410,977	-				+1.2
2,410,977	-				+0.3
2,410,977	-				-0.2
2,410,977	-				+0.5
2,410,977	-				-1.1
2,410,977	-				-0.2
2,410,977	-				-0.6
2,410,977	-				+0.2
2,410,977	-				+0.8
2,410,977	-				-0.2
2,410,977	-				-0.1
2,410,977	-				-0.7
2,410,977	-				-0.2
2,410,977	-				-0.5
2,410,977	-				+0.1
2,410,977	-				-0.2
2,410,977	-				+0.0
2,410,977	-				-1.4
2,410,977	-				+1.1
2,410,977	-				+0.4
2,410,977	-				-0.9
2,410,977	-				-0.0
2,410,977	-				-0.4
2,410,977	-				+0.1
2,410,977	-				-0.1
2,410,977	-				+0.5
2,410,977	-				+0.6
2,410,977	-				+0.3
2,410,977	-				+0.1
2,410,977	-				-0.2
2,410,977	-				+0.6
2,410,977	-				-0.2
2,410,977	-				-0.5
2,410,982	+				-1.8
2,410,982	+				+1.0
2,410,982	-				-0.5
2,410,982	-				+0.5
2,410,984	+				+0.8
2,410,984	+				+1.3
2,410,984	+				+0.2
2,410,988	-				-1.1
2,410,992	-				+0.6
2,410,992	-				-1.2
2,410,992	-				+1.9
2,410,992	-				-2.7
2,410,992	-				-0.6
2,410,992	-				-1.4
2,410,992	-				-0.2
2,411,013	-				+0.0
2,411,013	-				-0.3
2,411,026	+				+0.4
2,411,034	-				-0.8
2,411,129	+				-0.1
2,411,175	+				-0.7
2,411,176	+				+3.1
2,411,183	-				+0.1
2,411,184	-				-0.2
2,411,184	-				-0.3
2,411,185	+				+1.2
2,411,197	+				+0.9
2,411,215	-				-0.7
2,411,215	-				-1.6
2,411,255	+				-0.3
2,411,255	+				+0.5
2,411,255	+				+1.8
2,411,255	+				+0.9
2,411,255	+				-0.0
2,411,255	+				-0.6
2,411,265	+				+0.4
2,411,265	+				-0.6
2,411,265	+				+1.0
2,411,265	+				+0.4
2,411,265	+				+0.3
2,411,265	+				+0.4
2,411,265	+				-0.8
2,411,265	+				+0.3
2,411,265	+				-1.8
2,411,265	-				+0.1
2,411,266	-				-0.8
2,411,268	-				+0.8
2,411,268	-				+0.2
2,411,271	+				-0.4
2,411,273	-				+0.4
2,411,273	-				-1.2
2,411,273	-				-0.1
2,411,273	-				-0.2
2,411,273	-				-0.1
2,411,273	-				-0.5
2,411,273	-				-0.3
2,411,273	-				-0.3
2,411,273	-				+0.4
2,411,273	-				+0.4
2,411,276	+				-0.3
2,411,277	+				+2.2
2,411,277	+				+1.8
2,411,277	+				+0.1
2,411,277	+				+0.1
2,411,278	-				-0.8
2,411,278	-				-0.5
2,411,278	-				-0.2
2,411,284	-				-1.6
2,411,285	-				+1.1
2,411,285	-				+0.3
2,411,289	+				-0.4
2,411,291	+				-0.0
2,411,297	-				-1.4
2,411,299	-				-1.6
2,411,322	-				-0.0
2,411,335	+				+0.8
2,411,335	+				+0.5
2,411,335	+				+0.4
2,411,335	+				+1.8
2,411,335	+				-0.9
2,411,335	+				-1.9
2,411,335	+				-0.5
2,411,335	+				+0.3
2,411,335	+				+0.2
2,411,335	+				+0.2
2,411,335	+				+0.6
2,411,335	+				+0.1
2,411,337	+				+1.6
2,411,340	+				+0.8
2,411,340	+				-0.6
2,411,341	-				-0.8
2,411,343	-				+0.9
2,411,343	-				-1.0
2,411,343	-				+1.9
2,411,343	-				+0.5
2,411,343	-				-0.4
2,411,343	-				-2.4
2,411,343	-				+1.1
2,411,343	-				+0.9
2,411,343	-				+0.2
2,411,343	-				+0.6
2,411,343	-				-0.9
2,411,343	-				+0.4
2,411,343	-				+0.1
2,411,343	-				-0.0
2,411,343	-				-0.3
2,411,343	-				+0.5
2,411,343	-				+0.6
2,411,343	-				+0.7
2,411,343	-				-0.5
2,411,343	-				-0.6
2,411,343	-				-0.1
2,411,343	-				-0.3
2,411,343	-				+0.0
2,411,343	-				+0.2
2,411,343	-				-2.4
2,411,343	-				+0.6
2,411,343	-				+0.7
2,411,343	-				+1.3
2,411,345	-				+0.6
2,411,348	-				-0.7
2,411,358	-				+0.8
2,411,358	-				-0.7
2,411,358	-				+0.8
2,411,360	+				+1.1
2,411,360	+				+0.2
2,411,363	+				+0.2
2,411,363	+				-0.7
2,411,363	+				-0.9
2,411,363	-				+0.1
2,411,365	+				+0.5
2,411,371	-				+1.3
2,411,373	+				+0.4
2,411,381	-				+0.2
2,411,382	+				+0.6
2,411,382	+				+0.3
2,411,382	+				-0.2
2,411,382	+				+0.8
2,411,382	-				+0.1
2,411,390	+				+0.3
2,411,390	-				-0.2
2,411,390	-				-0.3
2,411,390	-				-1.5
2,411,390	-				+0.9
2,411,391	-				+0.6
2,411,393	+				-2.2
2,411,393	+				-1.0
2,411,403	+				-0.1
2,411,418	+				-0.4
2,411,418	+				+0.3
2,411,440	+				+0.3
2,411,440	+				+0.2
2,411,440	+				-2.0
2,411,440	+				+0.3
2,411,440	+				-2.1
2,411,440	+				-0.6
2,411,440	+				+0.2
2,411,440	+				+0.5
2,411,440	+				-0.0
2,411,440	+				-0.2
2,411,448	-				-0.8
2,411,448	-				-0.1
2,411,448	-				-0.2
2,411,469	+				-1.9
2,411,476	+				+0.8
2,411,476	+				+0.6
2,411,484	-				-0.9
2,411,484	-				+1.5
2,411,484	-				-0.3
2,411,484	-				-1.4
2,411,486	+				+0.2
2,411,521	-				-0.2
2,411,522	-				-0.3
2,411,569	+				-0.7
2,411,578	+				+0.0
2,411,578	+				-0.5
2,411,578	+				-0.2
2,411,578	+				-1.7
2,411,578	+				+0.3
2,411,578	+				+0.1
2,411,586	-				-0.2
2,411,589	+				+0.0
2,411,630	+				+0.5
2,411,636	+				+0.8
2,411,654	+				-0.9
2,411,662	-				-0.6
2,411,664	-				-0.1
2,411,664	-				+0.4
2,411,664	-				+0.9
2,411,664	-				+0.4
2,411,671	-				+0.6
2,411,674	-				+0.9
2,411,728	+				+0.5
2,411,731	-				-0.5
2,411,731	-				-0.1
2,411,756	+				+0.2
2,411,850	-				+0.8
2,411,850	-				-0.2
2,411,896	-				-2.4
2,411,922	+				+0.3
2,411,939	+				-1.0
2,411,970	+				+0.1
2,411,992	+		PGA1_c23240	0.11	-1.2
2,412,020	+		PGA1_c23240	0.13	-0.8
2,412,046	+		PGA1_c23240	0.16	-0.7
2,412,066	-		PGA1_c23240	0.18	+1.1
2,412,068	+		PGA1_c23240	0.18	-1.7
2,412,068	+		PGA1_c23240	0.18	+0.8
2,412,154	+		PGA1_c23240	0.26	-0.2
2,412,154	+		PGA1_c23240	0.26	-0.2
2,412,174	+		PGA1_c23240	0.28	+1.2
2,412,182	-		PGA1_c23240	0.29	+0.5
2,412,189	+		PGA1_c23240	0.29	-0.2
2,412,189	+		PGA1_c23240	0.29	+0.8
2,412,190	-		PGA1_c23240	0.30	-1.1
2,412,197	-		PGA1_c23240	0.30	+0.5
2,412,197	-		PGA1_c23240	0.30	+1.6
2,412,209	+		PGA1_c23240	0.31	-1.4
2,412,209	+		PGA1_c23240	0.31	+1.2
2,412,263	-		PGA1_c23240	0.36	+0.1
2,412,273	+		PGA1_c23240	0.37	+0.1
2,412,278	+		PGA1_c23240	0.38	-0.6
2,412,291	-		PGA1_c23240	0.39	-0.1
2,412,305	+		PGA1_c23240	0.40	-0.8
2,412,305	+		PGA1_c23240	0.40	+1.3
2,412,313	-		PGA1_c23240	0.41	+0.9
2,412,324	-		PGA1_c23240	0.42	+0.8
2,412,334	+		PGA1_c23240	0.43	+1.0
2,412,334	+		PGA1_c23240	0.43	-0.2
2,412,334	+		PGA1_c23240	0.43	+0.6
2,412,334	+		PGA1_c23240	0.43	+0.3
2,412,334	+		PGA1_c23240	0.43	+0.3
2,412,334	+		PGA1_c23240	0.43	-0.1
2,412,334	+		PGA1_c23240	0.43	-2.0
2,412,334	+		PGA1_c23240	0.43	+0.5
2,412,334	+		PGA1_c23240	0.43	-0.3
2,412,334	+		PGA1_c23240	0.43	+0.1
2,412,334	+		PGA1_c23240	0.43	+2.1
2,412,334	+		PGA1_c23240	0.43	+0.2
2,412,334	+		PGA1_c23240	0.43	+0.2
2,412,342	-		PGA1_c23240	0.44	+0.7
2,412,342	-		PGA1_c23240	0.44	+0.0
2,412,342	-		PGA1_c23240	0.44	+0.5
2,412,342	-		PGA1_c23240	0.44	+1.1
2,412,342	-		PGA1_c23240	0.44	+0.3
2,412,342	-		PGA1_c23240	0.44	+0.6
2,412,342	-		PGA1_c23240	0.44	+1.2
2,412,376	-		PGA1_c23240	0.47	-0.3
2,412,415	-		PGA1_c23240	0.51	-0.3
2,412,417	+		PGA1_c23240	0.51	+0.2
2,412,425	-		PGA1_c23240	0.52	+1.1
2,412,447	+		PGA1_c23240	0.54	+1.5
2,412,501	+		PGA1_c23240	0.59	+0.2
2,412,501	+		PGA1_c23240	0.59	+0.8
2,412,501	-		PGA1_c23240	0.59	+1.0
2,412,509	-		PGA1_c23240	0.60	-1.0
2,412,509	-		PGA1_c23240	0.60	+1.2
2,412,555	+		PGA1_c23240	0.64	+0.4
2,412,555	+		PGA1_c23240	0.64	-0.0
2,412,555	+		PGA1_c23240	0.64	-0.2
2,412,555	+		PGA1_c23240	0.64	+0.1
2,412,563	-		PGA1_c23240	0.65	-0.4
2,412,589	+		PGA1_c23240	0.68	+2.1
2,412,622	+		PGA1_c23240	0.71	-0.6
2,412,629	-		PGA1_c23240	0.71	-0.4
2,412,634	+		PGA1_c23240	0.72	-0.9
2,412,636	-		PGA1_c23240	0.72	+0.8
2,412,647	+		PGA1_c23240	0.73	-0.4
2,412,655	-		PGA1_c23240	0.74	-0.4
2,412,728	+		PGA1_c23240	0.81	+0.4
2,412,728	+		PGA1_c23240	0.81	+0.1
2,412,728	+		PGA1_c23240	0.81	+0.2
2,412,729	-		PGA1_c23240	0.81	+1.0
2,412,729	-		PGA1_c23240	0.81	+0.6
2,412,729	-		PGA1_c23240	0.81	-0.2
2,412,731	-		PGA1_c23240	0.81	+0.3
2,412,731	-		PGA1_c23240	0.81	+0.5
2,412,731	-		PGA1_c23240	0.81	+0.8
2,412,744	+		PGA1_c23240	0.82	+1.2
2,412,744	+		PGA1_c23240	0.82	-1.6
2,412,749	+		PGA1_c23240	0.83	+0.3
2,412,797	+		PGA1_c23240	0.87	+1.6
2,412,804	+		PGA1_c23240	0.88	-0.8
2,412,804	+		PGA1_c23240	0.88	-0.8
2,412,805	-		PGA1_c23240	0.88	-0.7
2,412,857	-				+0.5
2,412,861	+				-2.4
2,412,861	+				-0.3
2,412,866	-				+1.0
2,412,946	+				+0.8
2,413,033	+				-2.2
2,413,033	+				+0.3
2,413,033	+				+1.8
2,413,033	+				+0.2
2,413,033	+				+2.6
2,413,041	-				-1.6
2,413,046	-				-0.1
2,413,046	-				-1.8
2,413,048	+				+0.9
2,413,062	-				+0.2
2,413,065	+				-0.6
2,413,065	+				-1.9
2,413,073	-				+0.8
2,413,073	-				+0.3
2,413,073	-				-1.0
2,413,092	-				-1.6
2,413,097	+				+0.2
2,413,098	+				+1.2
2,413,105	+				+0.7
2,413,106	-				-0.7
2,413,106	-				-0.1
2,413,108	-				+1.0
2,413,114	-				-0.8
2,413,266	+		PGA1_c23250	0.26	-0.5
2,413,266	+		PGA1_c23250	0.26	+0.2
2,413,274	-		PGA1_c23250	0.27	-0.7
2,413,274	-		PGA1_c23250	0.27	+0.4
2,413,302	+		PGA1_c23250	0.30	-0.4
2,413,312	+		PGA1_c23250	0.31	-1.1
2,413,312	+		PGA1_c23250	0.31	-0.8
2,413,312	+		PGA1_c23250	0.31	+2.3
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2,413,400	+		PGA1_c23250	0.42	-2.1
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2,413,427	+		PGA1_c23250	0.45	-0.2
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2,413,498	-		PGA1_c23250	0.54	+0.1
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2,413,623	+		PGA1_c23250	0.69	+0.1
2,413,623	+		PGA1_c23250	0.69	+2.3
2,413,623	+		PGA1_c23250	0.69	+0.9
2,413,623	+		PGA1_c23250	0.69	+0.7
2,413,623	+		PGA1_c23250	0.69	+0.1
2,413,623	+		PGA1_c23250	0.69	-0.8
2,413,623	+		PGA1_c23250	0.69	-2.0
2,413,623	+		PGA1_c23250	0.69	-0.1
2,413,623	+		PGA1_c23250	0.69	-0.4
2,413,623	+		PGA1_c23250	0.69	-0.1
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2,413,631	-		PGA1_c23250	0.70	-2.7
2,413,631	-		PGA1_c23250	0.70	+1.0
2,413,631	-		PGA1_c23250	0.70	-1.3
2,413,631	-		PGA1_c23250	0.70	+0.1
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2,413,712	+		PGA1_c23250	0.79	+1.1
2,413,713	-		PGA1_c23250	0.79	-1.0
2,413,714	+		PGA1_c23250	0.79	-0.2
2,413,720	-		PGA1_c23250	0.80	+0.8
2,413,721	-		PGA1_c23250	0.80	+2.0
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2,413,822	-				-1.0
2,413,832	+				-1.2
2,413,835	-				+0.1
2,413,864	+				-0.1
2,413,896	+				-2.0
2,413,903	+				-0.2
2,413,904	-				+0.1
2,413,911	-				-1.2
2,413,911	-				+1.1
2,413,911	-				-0.3
2,413,915	+				+0.3