Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c16710

Experiment: m.b. Gentamicin 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Gentamicin 0.002 mg/ml
1,738,420	-				-0.0
1,738,443	-				-2.0
1,738,466	-				-0.1
1,738,490	+				-1.4
1,738,490	+				+1.8
1,738,498	+				+0.6
1,738,506	-				-1.8
1,738,521	-				-1.7
1,738,536	+				-0.8
1,738,536	+				-0.5
1,738,536	+				-1.2
1,738,536	+				-0.8
1,738,544	-				+0.1
1,738,544	-				+0.5
1,738,590	+		PGA1_c16700	0.14	+0.8
1,738,591	+		PGA1_c16700	0.14	+0.3
1,738,611	+		PGA1_c16700	0.16	-0.5
1,738,619	-		PGA1_c16700	0.17	+0.2
1,738,638	+		PGA1_c16700	0.19	-0.2
1,738,638	+		PGA1_c16700	0.19	+0.2
1,738,646	-		PGA1_c16700	0.20	-0.0
1,738,646	-		PGA1_c16700	0.20	-1.3
1,738,646	-		PGA1_c16700	0.20	-2.6
1,738,646	-		PGA1_c16700	0.20	-0.3
1,738,879	-		PGA1_c16700	0.45	+1.1
1,738,879	-		PGA1_c16700	0.45	-0.5
1,738,947	-		PGA1_c16700	0.52	-0.8
1,738,959	-		PGA1_c16700	0.53	+1.3
1,738,966	+		PGA1_c16700	0.54	+0.8
1,738,971	+		PGA1_c16700	0.54	-0.0
1,738,999	+		PGA1_c16700	0.57	-0.6
1,738,999	+		PGA1_c16700	0.57	+0.8
1,738,999	+		PGA1_c16700	0.57	+0.3
1,739,002	-		PGA1_c16700	0.58	+1.9
1,739,007	-		PGA1_c16700	0.58	-0.1
1,739,021	-		PGA1_c16700	0.60	+0.6
1,739,051	-		PGA1_c16700	0.63	-0.6
1,739,077	-		PGA1_c16700	0.65	+1.2
1,739,083	-		PGA1_c16700	0.66	+0.4
1,739,118	-		PGA1_c16700	0.70	+0.0
1,739,118	-		PGA1_c16700	0.70	+0.3
1,739,122	+		PGA1_c16700	0.70	-2.0
1,739,130	-		PGA1_c16700	0.71	-0.2
1,739,155	+		PGA1_c16700	0.74	+0.4
1,739,163	-		PGA1_c16700	0.74	-0.0
1,739,203	+		PGA1_c16700	0.79	-0.6
1,739,203	+		PGA1_c16700	0.79	+0.8
1,739,211	-		PGA1_c16700	0.79	+0.5
1,739,221	-		PGA1_c16700	0.81	+1.4
1,739,230	-		PGA1_c16700	0.81	+1.1
1,739,230	-		PGA1_c16700	0.81	+0.6
1,739,269	-		PGA1_c16700	0.86	-2.4
1,739,269	-		PGA1_c16700	0.86	-0.6
1,739,277	-		PGA1_c16700	0.86	+0.8
1,739,322	-				+1.4
1,739,322	-				+0.3
1,739,329	-				+0.4
1,739,457	+				+0.0
1,739,465	-				-0.0
1,739,479	+				+1.6
1,739,537	+		PGA1_c16710	0.12	+1.9
1,739,550	-		PGA1_c16710	0.13	-0.8
1,739,553	+		PGA1_c16710	0.13	-0.2
1,739,553	+		PGA1_c16710	0.13	-0.2
1,739,555	-		PGA1_c16710	0.13	+0.5
1,739,561	-		PGA1_c16710	0.14	+1.4
1,739,576	-		PGA1_c16710	0.15	-0.6
1,739,578	+		PGA1_c16710	0.15	+1.5
1,739,578	+		PGA1_c16710	0.15	+2.4
1,739,578	+		PGA1_c16710	0.15	-0.2
1,739,586	-		PGA1_c16710	0.16	+0.8
1,739,586	-		PGA1_c16710	0.16	-1.4
1,739,640	+		PGA1_c16710	0.20	-0.0
1,739,652	-		PGA1_c16710	0.21	+0.6
1,739,652	-		PGA1_c16710	0.21	-0.8
1,739,673	+		PGA1_c16710	0.23	-0.2
1,739,685	+		PGA1_c16710	0.24	+1.3
1,739,693	-		PGA1_c16710	0.24	-1.2
1,739,715	+		PGA1_c16710	0.26	+1.0
1,739,723	-		PGA1_c16710	0.27	+0.8
1,739,798	-		PGA1_c16710	0.33	+1.6
1,739,865	-		PGA1_c16710	0.38	+0.1
1,739,867	-		PGA1_c16710	0.38	+1.4
1,739,980	-		PGA1_c16710	0.47	+0.6
1,739,993	-		PGA1_c16710	0.48	+0.0
1,740,002	-		PGA1_c16710	0.49	+0.5
1,740,012	-		PGA1_c16710	0.50	+1.1
1,740,030	+		PGA1_c16710	0.51	-0.6
1,740,137	-		PGA1_c16710	0.60	+0.4
1,740,161	-		PGA1_c16710	0.62	+1.4
1,740,181	+		PGA1_c16710	0.63	+1.5
1,740,240	-		PGA1_c16710	0.68	+0.1
1,740,274	-		PGA1_c16710	0.71	-1.8
1,740,334	+		PGA1_c16710	0.75	-2.4
1,740,344	+		PGA1_c16710	0.76	-0.2
1,740,461	-		PGA1_c16710	0.85	-0.5
1,740,461	-		PGA1_c16710	0.85	+0.4
1,740,528	+				+0.8
1,740,546	-				+0.4
1,740,602	+				+1.1
1,740,602	+				-1.0
1,740,710	+				-1.2
1,740,745	-				+0.5
1,740,747	+				-0.0
1,740,782	+				-1.0
1,740,816	+		PGA1_c16720	0.11	+0.8
1,740,816	+		PGA1_c16720	0.11	+0.8
1,740,816	+		PGA1_c16720	0.11	+2.8
1,740,816	+		PGA1_c16720	0.11	+0.8
1,740,816	+		PGA1_c16720	0.11	-0.5
1,740,824	-		PGA1_c16720	0.12	+1.4
1,740,848	-		PGA1_c16720	0.14	-0.6
1,740,865	+		PGA1_c16720	0.16	-0.0
1,740,865	+		PGA1_c16720	0.16	-2.4
1,740,953	-		PGA1_c16720	0.23	-1.2
1,740,981	+		PGA1_c16720	0.26	-0.8
1,741,048	+		PGA1_c16720	0.32	-2.0
1,741,086	+		PGA1_c16720	0.35	+0.0
1,741,086	+		PGA1_c16720	0.35	-0.5
1,741,157	-		PGA1_c16720	0.41	-0.2
1,741,261	+		PGA1_c16720	0.50	+0.0
1,741,289	+		PGA1_c16720	0.52	-0.6
1,741,289	+		PGA1_c16720	0.52	-0.6
1,741,289	+		PGA1_c16720	0.52	-0.2
1,741,289	+		PGA1_c16720	0.52	+0.8
1,741,297	-		PGA1_c16720	0.53	+1.4
1,741,297	-		PGA1_c16720	0.53	+0.2
1,741,317	-		PGA1_c16720	0.55	+0.0
1,741,385	-		PGA1_c16720	0.61	+0.5
1,741,401	+		PGA1_c16720	0.62	-2.8
1,741,409	-		PGA1_c16720	0.63	+0.8
1,741,448	+		PGA1_c16720	0.66	+0.5
1,741,459	+		PGA1_c16720	0.67	+0.2
1,741,511	+		PGA1_c16720	0.72	-0.5
1,741,519	-		PGA1_c16720	0.72	+0.6
1,741,532	-		PGA1_c16720	0.74	-1.2
1,741,558	+		PGA1_c16720	0.76	+1.0
1,741,558	+		PGA1_c16720	0.76	-0.4
1,741,566	-		PGA1_c16720	0.76	-0.8
1,741,594	+		PGA1_c16720	0.79	+1.1
1,741,602	-		PGA1_c16720	0.80	-0.5
1,741,608	-		PGA1_c16720	0.80	+1.2
1,741,620	+		PGA1_c16720	0.81	-0.2
1,741,625	+		PGA1_c16720	0.82	+0.6
1,741,633	-		PGA1_c16720	0.82	+1.2