Strain Fitness in Dechlorosoma suillum PS around Dsui_3525

Experiment: Anaero. lactate (C), perchlorate electron acceptor

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_3524 and Dsui_3525 are separated by 1 nucleotidesDsui_3525 and Dsui_3526 are separated by 12 nucleotidesDsui_3526 and Dsui_3527 are separated by 138 nucleotides Dsui_3524: Dsui_3524 - signal transduction histidine kinase, at 3,790,612 to 3,792,000 _3524 Dsui_3525: Dsui_3525 - CDP-diacylglycerol--serine O-phosphatidyltransferase, at 3,792,002 to 3,792,766 _3525 Dsui_3526: Dsui_3526 - phosphatidylserine decarboxylase, at 3,792,779 to 3,793,423 _3526 Dsui_3527: Dsui_3527 - ketol-acid reductoisomerase, at 3,793,562 to 3,794,578 _3527 Position (kb) 3792 3793Strain fitness (log2 ratio) -2 -1 0 1at 3791.137 kb on - strand, within Dsui_3524at 3791.231 kb on + strand, within Dsui_3524at 3791.239 kb on - strand, within Dsui_3524at 3791.386 kb on + strand, within Dsui_3524at 3791.506 kb on + strand, within Dsui_3524at 3791.506 kb on + strand, within Dsui_3524at 3791.511 kb on + strand, within Dsui_3524at 3791.511 kb on + strand, within Dsui_3524at 3791.514 kb on - strand, within Dsui_3524at 3791.740 kb on - strand, within Dsui_3524at 3791.878 kb on - strandat 3791.884 kb on - strandat 3791.892 kb on + strandat 3793.517 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor
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3,791,137 - Dsui_3524 0.38 -0.6
3,791,231 + Dsui_3524 0.45 +0.1
3,791,239 - Dsui_3524 0.45 -0.7
3,791,386 + Dsui_3524 0.56 -1.8
3,791,506 + Dsui_3524 0.64 -0.3
3,791,506 + Dsui_3524 0.64 -0.1
3,791,511 + Dsui_3524 0.65 +0.5
3,791,511 + Dsui_3524 0.65 -1.0
3,791,514 - Dsui_3524 0.65 +1.1
3,791,740 - Dsui_3524 0.81 +1.5
3,791,878 - +0.3
3,791,884 - -0.3
3,791,892 + -0.9
3,793,517 - +0.3

Or see this region's nucleotide sequence