Experiment: Anaero. lactate (C), perchlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3077 and Dsui_3078 are separated by 41 nucleotides Dsui_3078 and Dsui_3079 are separated by 89 nucleotides
Dsui_3077: Dsui_3077 - hypothetical protein, at 3,292,438 to 3,293,505
_3077
Dsui_3078: Dsui_3078 - methyl-accepting chemotaxis protein, at 3,293,547 to 3,295,166
_3078
Dsui_3079: Dsui_3079 - serine/threonine protein kinase, at 3,295,256 to 3,296,653
_3079
Position (kb)
3293
3294
3295
3296 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3292.682 kb on + strand, within Dsui_3077 at 3292.688 kb on + strand, within Dsui_3077 at 3292.690 kb on - strand at 3292.844 kb on + strand, within Dsui_3077 at 3292.861 kb on + strand, within Dsui_3077 at 3292.895 kb on + strand at 3292.913 kb on - strand at 3292.946 kb on + strand, within Dsui_3077 at 3293.027 kb on + strand at 3293.107 kb on + strand, within Dsui_3077 at 3293.149 kb on - strand, within Dsui_3077 at 3293.292 kb on + strand, within Dsui_3077 at 3293.321 kb on + strand, within Dsui_3077 at 3293.346 kb on + strand, within Dsui_3077 at 3293.390 kb on + strand, within Dsui_3077 at 3293.397 kb on + strand, within Dsui_3077 at 3293.439 kb on - strand at 3293.460 kb on + strand at 3293.470 kb on - strand at 3293.500 kb on + strand at 3293.503 kb on - strand at 3293.503 kb on - strand at 3293.520 kb on + strand at 3293.541 kb on - strand at 3293.551 kb on - strand at 3293.599 kb on + strand at 3293.628 kb on - strand at 3293.672 kb on - strand at 3293.721 kb on - strand at 3293.873 kb on + strand, within Dsui_3078 at 3293.873 kb on + strand, within Dsui_3078 at 3293.876 kb on - strand, within Dsui_3078 at 3293.878 kb on + strand, within Dsui_3078 at 3293.909 kb on + strand, within Dsui_3078 at 3293.909 kb on + strand, within Dsui_3078 at 3293.962 kb on + strand, within Dsui_3078 at 3293.980 kb on - strand, within Dsui_3078 at 3293.991 kb on + strand, within Dsui_3078 at 3294.071 kb on + strand, within Dsui_3078 at 3294.409 kb on + strand, within Dsui_3078 at 3294.422 kb on - strand, within Dsui_3078 at 3294.442 kb on - strand, within Dsui_3078 at 3294.513 kb on - strand, within Dsui_3078 at 3294.533 kb on - strand, within Dsui_3078 at 3294.586 kb on + strand, within Dsui_3078 at 3294.661 kb on - strand, within Dsui_3078 at 3294.839 kb on + strand, within Dsui_3078 at 3294.882 kb on + strand, within Dsui_3078 at 3294.901 kb on - strand, within Dsui_3078 at 3294.971 kb on - strand, within Dsui_3078 at 3295.029 kb on + strand at 3295.039 kb on + strand at 3295.064 kb on - strand at 3295.160 kb on + strand at 3295.168 kb on - strand at 3295.486 kb on + strand, within Dsui_3079 at 3295.494 kb on - strand, within Dsui_3079 at 3295.494 kb on - strand, within Dsui_3079 at 3295.501 kb on + strand, within Dsui_3079 at 3295.509 kb on - strand, within Dsui_3079 at 3295.552 kb on + strand, within Dsui_3079 at 3295.555 kb on - strand, within Dsui_3079 at 3295.568 kb on - strand, within Dsui_3079 at 3295.639 kb on + strand at 3295.692 kb on + strand, within Dsui_3079 at 3295.712 kb on + strand, within Dsui_3079 at 3295.759 kb on + strand, within Dsui_3079 at 3295.783 kb on - strand, within Dsui_3079 at 3295.783 kb on - strand, within Dsui_3079 at 3295.818 kb on + strand, within Dsui_3079 at 3295.826 kb on - strand, within Dsui_3079 at 3295.845 kb on - strand, within Dsui_3079 at 3295.934 kb on + strand, within Dsui_3079 at 3295.942 kb on - strand, within Dsui_3079 at 3295.952 kb on + strand, within Dsui_3079 at 3295.975 kb on - strand, within Dsui_3079 at 3296.040 kb on - strand, within Dsui_3079 at 3296.073 kb on + strand at 3296.073 kb on + strand, within Dsui_3079 at 3296.073 kb on + strand, within Dsui_3079 at 3296.073 kb on + strand at 3296.073 kb on + strand at 3296.073 kb on + strand at 3296.073 kb on + strand, within Dsui_3079 at 3296.073 kb on + strand, within Dsui_3079 at 3296.075 kb on - strand, within Dsui_3079 at 3296.081 kb on - strand, within Dsui_3079 at 3296.081 kb on - strand, within Dsui_3079 at 3296.081 kb on - strand, within Dsui_3079 at 3296.081 kb on - strand, within Dsui_3079 at 3296.081 kb on - strand, within Dsui_3079 at 3296.081 kb on - strand, within Dsui_3079 at 3296.081 kb on - strand, within Dsui_3079 at 3296.145 kb on + strand, within Dsui_3079 at 3296.147 kb on + strand at 3296.147 kb on - strand, within Dsui_3079
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor remove 3,292,682 + Dsui_3077 0.23 +1.4 3,292,688 + Dsui_3077 0.23 -0.8 3,292,690 - -1.3 3,292,844 + Dsui_3077 0.38 +0.3 3,292,861 + Dsui_3077 0.40 +0.2 3,292,895 + +1.6 3,292,913 - -0.1 3,292,946 + Dsui_3077 0.48 -0.1 3,293,027 + +1.5 3,293,107 + Dsui_3077 0.63 -0.7 3,293,149 - Dsui_3077 0.67 +0.5 3,293,292 + Dsui_3077 0.80 +0.1 3,293,321 + Dsui_3077 0.83 -0.2 3,293,346 + Dsui_3077 0.85 +0.4 3,293,390 + Dsui_3077 0.89 +0.4 3,293,397 + Dsui_3077 0.90 -0.5 3,293,439 - +0.1 3,293,460 + +0.0 3,293,470 - -1.3 3,293,500 + -0.1 3,293,503 - +1.4 3,293,503 - -1.3 3,293,520 + -0.0 3,293,541 - +0.2 3,293,551 - -1.1 3,293,599 + +0.5 3,293,628 - +0.6 3,293,672 - -0.5 3,293,721 - -0.1 3,293,873 + Dsui_3078 0.20 +0.6 3,293,873 + Dsui_3078 0.20 +0.2 3,293,876 - Dsui_3078 0.20 +0.9 3,293,878 + Dsui_3078 0.20 +0.2 3,293,909 + Dsui_3078 0.22 +0.4 3,293,909 + Dsui_3078 0.22 +0.0 3,293,962 + Dsui_3078 0.26 -0.0 3,293,980 - Dsui_3078 0.27 +0.6 3,293,991 + Dsui_3078 0.27 +0.1 3,294,071 + Dsui_3078 0.32 +0.6 3,294,409 + Dsui_3078 0.53 +0.3 3,294,422 - Dsui_3078 0.54 -0.3 3,294,442 - Dsui_3078 0.55 -0.0 3,294,513 - Dsui_3078 0.60 -1.6 3,294,533 - Dsui_3078 0.61 +0.4 3,294,586 + Dsui_3078 0.64 -0.3 3,294,661 - Dsui_3078 0.69 +1.4 3,294,839 + Dsui_3078 0.80 +1.3 3,294,882 + Dsui_3078 0.82 +0.9 3,294,901 - Dsui_3078 0.84 +0.5 3,294,971 - Dsui_3078 0.88 -0.0 3,295,029 + +0.9 3,295,039 + +0.1 3,295,064 - +0.3 3,295,160 + +0.0 3,295,168 - -1.0 3,295,486 + Dsui_3079 0.16 +0.1 3,295,494 - Dsui_3079 0.17 +0.4 3,295,494 - Dsui_3079 0.17 +0.5 3,295,501 + Dsui_3079 0.18 +0.7 3,295,509 - Dsui_3079 0.18 -0.8 3,295,552 + Dsui_3079 0.21 -0.6 3,295,555 - Dsui_3079 0.21 +0.1 3,295,568 - Dsui_3079 0.22 +0.1 3,295,639 + +1.1 3,295,692 + Dsui_3079 0.31 -0.4 3,295,712 + Dsui_3079 0.33 +0.3 3,295,759 + Dsui_3079 0.36 +0.4 3,295,783 - Dsui_3079 0.38 +0.4 3,295,783 - Dsui_3079 0.38 +0.9 3,295,818 + Dsui_3079 0.40 -0.7 3,295,826 - Dsui_3079 0.41 +0.0 3,295,845 - Dsui_3079 0.42 +0.5 3,295,934 + Dsui_3079 0.48 +0.4 3,295,942 - Dsui_3079 0.49 +0.2 3,295,952 + Dsui_3079 0.50 -0.5 3,295,975 - Dsui_3079 0.51 +1.0 3,296,040 - Dsui_3079 0.56 +0.3 3,296,073 + +1.5 3,296,073 + Dsui_3079 0.58 -0.2 3,296,073 + Dsui_3079 0.58 -1.9 3,296,073 + +1.4 3,296,073 + +3.4 3,296,073 + +0.5 3,296,073 + Dsui_3079 0.58 +2.9 3,296,073 + Dsui_3079 0.58 +1.9 3,296,075 - Dsui_3079 0.59 +0.3 3,296,081 - Dsui_3079 0.59 +1.1 3,296,081 - Dsui_3079 0.59 +0.1 3,296,081 - Dsui_3079 0.59 -0.3 3,296,081 - Dsui_3079 0.59 +0.3 3,296,081 - Dsui_3079 0.59 +0.2 3,296,081 - Dsui_3079 0.59 -0.2 3,296,081 - Dsui_3079 0.59 +0.3 3,296,145 + Dsui_3079 0.64 -0.3 3,296,147 + +0.9 3,296,147 - Dsui_3079 0.64 +0.4
Or see this region's nucleotide sequence