Experiment: Anaero. lactate (C), perchlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3031 and Dsui_3032 are separated by 33 nucleotides Dsui_3032 and Dsui_3033 overlap by 4 nucleotides
Dsui_3031: Dsui_3031 - enoyl-(acyl-carrier-protein) reductase (NADH), at 3,243,050 to 3,243,814
_3031
Dsui_3032: Dsui_3032 - phosphotransacetylase, at 3,243,848 to 3,245,260
_3032
Dsui_3033: Dsui_3033 - acetate kinase, at 3,245,257 to 3,246,450
_3033
Position (kb)
3243
3244
3245
3246 Strain fitness (log2 ratio)
-1
0
1 at 3242.993 kb on + strand at 3242.994 kb on + strand at 3243.001 kb on - strand at 3243.009 kb on - strand at 3243.042 kb on - strand at 3243.097 kb on + strand at 3243.103 kb on + strand at 3243.118 kb on - strand at 3243.118 kb on - strand at 3243.118 kb on - strand at 3243.118 kb on - strand at 3243.284 kb on + strand, within Dsui_3031 at 3243.321 kb on + strand, within Dsui_3031 at 3243.359 kb on + strand, within Dsui_3031 at 3243.367 kb on - strand, within Dsui_3031 at 3243.380 kb on + strand, within Dsui_3031 at 3243.441 kb on + strand, within Dsui_3031 at 3243.495 kb on + strand, within Dsui_3031 at 3243.508 kb on - strand at 3243.684 kb on + strand, within Dsui_3031 at 3243.825 kb on - strand at 3243.851 kb on - strand at 3243.857 kb on + strand at 3243.915 kb on + strand at 3244.034 kb on + strand, within Dsui_3032 at 3244.042 kb on - strand, within Dsui_3032 at 3244.498 kb on + strand, within Dsui_3032 at 3244.524 kb on + strand, within Dsui_3032 at 3244.532 kb on - strand, within Dsui_3032 at 3244.737 kb on + strand, within Dsui_3032 at 3244.798 kb on + strand, within Dsui_3032 at 3244.838 kb on - strand, within Dsui_3032 at 3244.959 kb on - strand, within Dsui_3032 at 3244.959 kb on - strand, within Dsui_3032 at 3245.072 kb on + strand, within Dsui_3032 at 3245.269 kb on + strand at 3245.375 kb on - strand at 3245.394 kb on + strand, within Dsui_3033 at 3245.422 kb on + strand, within Dsui_3033 at 3245.495 kb on + strand, within Dsui_3033 at 3245.503 kb on - strand, within Dsui_3033 at 3245.625 kb on - strand, within Dsui_3033 at 3245.658 kb on - strand, within Dsui_3033 at 3245.734 kb on - strand, within Dsui_3033 at 3245.759 kb on + strand, within Dsui_3033 at 3245.874 kb on - strand, within Dsui_3033 at 3245.889 kb on - strand, within Dsui_3033 at 3245.935 kb on + strand, within Dsui_3033 at 3246.241 kb on - strand, within Dsui_3033
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor remove 3,242,993 + -0.5 3,242,994 + -0.4 3,243,001 - +0.9 3,243,009 - +0.1 3,243,042 - -0.1 3,243,097 + -0.4 3,243,103 + -0.3 3,243,118 - -0.4 3,243,118 - -0.4 3,243,118 - +0.3 3,243,118 - -1.4 3,243,284 + Dsui_3031 0.31 -0.0 3,243,321 + Dsui_3031 0.35 +0.4 3,243,359 + Dsui_3031 0.40 +0.1 3,243,367 - Dsui_3031 0.41 -0.8 3,243,380 + Dsui_3031 0.43 +0.2 3,243,441 + Dsui_3031 0.51 +0.1 3,243,495 + Dsui_3031 0.58 +0.1 3,243,508 - +0.3 3,243,684 + Dsui_3031 0.83 -0.7 3,243,825 - -1.1 3,243,851 - -1.0 3,243,857 + -0.2 3,243,915 + -0.4 3,244,034 + Dsui_3032 0.13 -1.4 3,244,042 - Dsui_3032 0.14 -0.8 3,244,498 + Dsui_3032 0.46 -0.5 3,244,524 + Dsui_3032 0.48 -0.6 3,244,532 - Dsui_3032 0.48 +0.4 3,244,737 + Dsui_3032 0.63 -0.2 3,244,798 + Dsui_3032 0.67 -0.3 3,244,838 - Dsui_3032 0.70 -0.1 3,244,959 - Dsui_3032 0.79 -0.9 3,244,959 - Dsui_3032 0.79 -0.3 3,245,072 + Dsui_3032 0.87 -0.3 3,245,269 + +0.3 3,245,375 - -0.1 3,245,394 + Dsui_3033 0.11 -0.1 3,245,422 + Dsui_3033 0.14 -0.5 3,245,495 + Dsui_3033 0.20 -0.4 3,245,503 - Dsui_3033 0.21 -0.4 3,245,625 - Dsui_3033 0.31 +0.4 3,245,658 - Dsui_3033 0.34 -1.1 3,245,734 - Dsui_3033 0.40 -0.3 3,245,759 + Dsui_3033 0.42 -0.0 3,245,874 - Dsui_3033 0.52 -1.2 3,245,889 - Dsui_3033 0.53 +0.2 3,245,935 + Dsui_3033 0.57 -0.3 3,246,241 - Dsui_3033 0.82 -1.5
Or see this region's nucleotide sequence