Experiment: Anaero. lactate (C), perchlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2434 and Dsui_2435 overlap by 4 nucleotides Dsui_2435 and Dsui_2436 are separated by 88 nucleotides
Dsui_2434: Dsui_2434 - excinuclease ABC, B subunit, at 2,593,292 to 2,595,364
_2434
Dsui_2435: Dsui_2435 - protein-tyrosine-phosphatase, at 2,595,361 to 2,595,888
_2435
Dsui_2436: Dsui_2436 - ribonuclease, Rne/Rng family, at 2,595,977 to 2,598,739
_2436
Position (kb)
2595
2596 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2594.389 kb on + strand, within Dsui_2434 at 2594.389 kb on + strand, within Dsui_2434 at 2594.389 kb on + strand, within Dsui_2434 at 2594.389 kb on + strand, within Dsui_2434 at 2594.389 kb on + strand, within Dsui_2434 at 2594.389 kb on + strand, within Dsui_2434 at 2594.397 kb on - strand at 2594.397 kb on - strand at 2594.445 kb on + strand, within Dsui_2434 at 2594.535 kb on + strand, within Dsui_2434 at 2594.580 kb on + strand, within Dsui_2434 at 2594.612 kb on + strand, within Dsui_2434 at 2594.627 kb on + strand, within Dsui_2434 at 2594.667 kb on + strand, within Dsui_2434 at 2594.686 kb on + strand, within Dsui_2434 at 2594.711 kb on + strand, within Dsui_2434 at 2594.711 kb on + strand, within Dsui_2434 at 2594.753 kb on - strand, within Dsui_2434 at 2594.767 kb on + strand, within Dsui_2434 at 2594.798 kb on - strand, within Dsui_2434 at 2594.799 kb on - strand, within Dsui_2434 at 2594.861 kb on + strand, within Dsui_2434 at 2594.861 kb on + strand, within Dsui_2434 at 2594.871 kb on + strand, within Dsui_2434 at 2595.157 kb on + strand at 2595.161 kb on + strand at 2595.225 kb on - strand at 2595.260 kb on + strand at 2595.266 kb on + strand at 2595.312 kb on + strand at 2595.351 kb on + strand at 2595.361 kb on - strand at 2595.363 kb on + strand at 2595.388 kb on + strand at 2595.396 kb on - strand at 2595.518 kb on + strand, within Dsui_2435 at 2595.556 kb on - strand, within Dsui_2435 at 2595.556 kb on - strand, within Dsui_2435 at 2595.620 kb on + strand, within Dsui_2435 at 2595.680 kb on + strand, within Dsui_2435 at 2595.680 kb on + strand, within Dsui_2435 at 2595.748 kb on - strand, within Dsui_2435 at 2595.769 kb on + strand, within Dsui_2435 at 2595.779 kb on + strand, within Dsui_2435 at 2595.859 kb on + strand at 2595.865 kb on + strand at 2595.882 kb on + strand at 2595.936 kb on + strand at 2595.944 kb on + strand at 2595.968 kb on + strand at 2596.027 kb on - strand at 2596.074 kb on + strand at 2596.098 kb on - strand at 2596.162 kb on - strand at 2596.206 kb on - strand at 2596.234 kb on - strand at 2596.253 kb on - strand at 2596.271 kb on - strand, within Dsui_2436 at 2596.453 kb on + strand, within Dsui_2436 at 2596.484 kb on - strand, within Dsui_2436 at 2596.588 kb on - strand, within Dsui_2436 at 2596.637 kb on + strand, within Dsui_2436 at 2596.662 kb on + strand at 2596.718 kb on - strand, within Dsui_2436 at 2596.754 kb on - strand, within Dsui_2436 at 2596.754 kb on - strand, within Dsui_2436 at 2596.769 kb on - strand, within Dsui_2436
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor remove 2,594,389 + Dsui_2434 0.53 -0.2 2,594,389 + Dsui_2434 0.53 -0.7 2,594,389 + Dsui_2434 0.53 -0.6 2,594,389 + Dsui_2434 0.53 +0.2 2,594,389 + Dsui_2434 0.53 -0.8 2,594,389 + Dsui_2434 0.53 -0.0 2,594,397 - +0.4 2,594,397 - +2.0 2,594,445 + Dsui_2434 0.56 -0.0 2,594,535 + Dsui_2434 0.60 -1.4 2,594,580 + Dsui_2434 0.62 +0.6 2,594,612 + Dsui_2434 0.64 -0.6 2,594,627 + Dsui_2434 0.64 +1.1 2,594,667 + Dsui_2434 0.66 -0.4 2,594,686 + Dsui_2434 0.67 +0.1 2,594,711 + Dsui_2434 0.68 -0.6 2,594,711 + Dsui_2434 0.68 -0.8 2,594,753 - Dsui_2434 0.70 -1.8 2,594,767 + Dsui_2434 0.71 -0.4 2,594,798 - Dsui_2434 0.73 +0.0 2,594,799 - Dsui_2434 0.73 -1.2 2,594,861 + Dsui_2434 0.76 -1.4 2,594,861 + Dsui_2434 0.76 -0.7 2,594,871 + Dsui_2434 0.76 -1.1 2,595,157 + +0.1 2,595,161 + +0.4 2,595,225 - +0.2 2,595,260 + -0.5 2,595,266 + +1.4 2,595,312 + +0.6 2,595,351 + +0.1 2,595,361 - +1.3 2,595,363 + +0.5 2,595,388 + +0.1 2,595,396 - +0.0 2,595,518 + Dsui_2435 0.30 -0.3 2,595,556 - Dsui_2435 0.37 +0.6 2,595,556 - Dsui_2435 0.37 -1.5 2,595,620 + Dsui_2435 0.49 -0.1 2,595,680 + Dsui_2435 0.60 +0.7 2,595,680 + Dsui_2435 0.60 -0.3 2,595,748 - Dsui_2435 0.73 -0.6 2,595,769 + Dsui_2435 0.77 +1.1 2,595,779 + Dsui_2435 0.79 -0.3 2,595,859 + -0.6 2,595,865 + +0.0 2,595,882 + +0.6 2,595,936 + -1.3 2,595,944 + +1.0 2,595,968 + -0.6 2,596,027 - +0.3 2,596,074 + +0.9 2,596,098 - -0.4 2,596,162 - -0.8 2,596,206 - +0.1 2,596,234 - +0.4 2,596,253 - -0.0 2,596,271 - Dsui_2436 0.11 +1.1 2,596,453 + Dsui_2436 0.17 -1.2 2,596,484 - Dsui_2436 0.18 -0.5 2,596,588 - Dsui_2436 0.22 -1.0 2,596,637 + Dsui_2436 0.24 -0.6 2,596,662 + +3.0 2,596,718 - Dsui_2436 0.27 -3.0 2,596,754 - Dsui_2436 0.28 +0.0 2,596,754 - Dsui_2436 0.28 -0.7 2,596,769 - Dsui_2436 0.29 +1.3
Or see this region's nucleotide sequence