Experiment: Anaero. lactate (C), perchlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2319 and Dsui_2320 are separated by 164 nucleotides Dsui_2320 and Dsui_2321 are separated by 52 nucleotides
Dsui_2319: Dsui_2319 - transcriptional regulator, at 2,473,716 to 2,474,675
_2319
Dsui_2320: Dsui_2320 - Protein of unknown function (DUF2863), at 2,474,840 to 2,476,018
_2320
Dsui_2321: Dsui_2321 - site-specific recombinase, at 2,476,071 to 2,478,146
_2321
Position (kb)
2474
2475
2476
2477 Strain fitness (log2 ratio)
-1
0
1 at 2473.894 kb on + strand, within Dsui_2319 at 2473.894 kb on + strand, within Dsui_2319 at 2473.900 kb on + strand, within Dsui_2319 at 2473.939 kb on - strand at 2473.975 kb on - strand, within Dsui_2319 at 2474.018 kb on - strand, within Dsui_2319 at 2474.052 kb on - strand, within Dsui_2319 at 2474.113 kb on - strand at 2474.113 kb on - strand, within Dsui_2319 at 2474.207 kb on + strand, within Dsui_2319 at 2474.287 kb on + strand, within Dsui_2319 at 2474.296 kb on + strand, within Dsui_2319 at 2474.310 kb on - strand, within Dsui_2319 at 2474.355 kb on + strand, within Dsui_2319 at 2474.380 kb on + strand, within Dsui_2319 at 2474.411 kb on - strand, within Dsui_2319 at 2474.424 kb on + strand, within Dsui_2319 at 2474.432 kb on - strand, within Dsui_2319 at 2474.467 kb on + strand, within Dsui_2319 at 2474.501 kb on - strand at 2474.511 kb on + strand, within Dsui_2319 at 2474.613 kb on + strand at 2474.752 kb on - strand at 2474.767 kb on + strand at 2474.788 kb on - strand at 2474.969 kb on - strand, within Dsui_2320 at 2475.103 kb on - strand, within Dsui_2320 at 2475.220 kb on + strand, within Dsui_2320 at 2475.376 kb on + strand, within Dsui_2320 at 2475.532 kb on + strand at 2475.598 kb on + strand at 2475.631 kb on + strand, within Dsui_2320 at 2475.698 kb on + strand at 2475.734 kb on + strand, within Dsui_2320 at 2475.830 kb on + strand at 2475.911 kb on - strand at 2475.981 kb on - strand at 2475.981 kb on - strand at 2476.020 kb on + strand at 2476.020 kb on + strand at 2476.028 kb on - strand at 2476.038 kb on - strand at 2476.051 kb on - strand at 2476.134 kb on + strand at 2476.344 kb on - strand, within Dsui_2321 at 2476.763 kb on - strand, within Dsui_2321 at 2476.937 kb on - strand, within Dsui_2321 at 2476.985 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor remove 2,473,894 + Dsui_2319 0.19 +1.3 2,473,894 + Dsui_2319 0.19 -0.4 2,473,900 + Dsui_2319 0.19 +1.7 2,473,939 - +0.9 2,473,975 - Dsui_2319 0.27 -0.3 2,474,018 - Dsui_2319 0.31 +0.9 2,474,052 - Dsui_2319 0.35 +0.8 2,474,113 - -0.1 2,474,113 - Dsui_2319 0.41 +0.6 2,474,207 + Dsui_2319 0.51 -0.4 2,474,287 + Dsui_2319 0.59 -0.1 2,474,296 + Dsui_2319 0.60 -0.1 2,474,310 - Dsui_2319 0.62 -1.1 2,474,355 + Dsui_2319 0.67 +0.1 2,474,380 + Dsui_2319 0.69 +0.2 2,474,411 - Dsui_2319 0.72 +0.2 2,474,424 + Dsui_2319 0.74 +1.0 2,474,432 - Dsui_2319 0.75 -0.2 2,474,467 + Dsui_2319 0.78 -0.7 2,474,501 - -0.4 2,474,511 + Dsui_2319 0.83 +0.3 2,474,613 + -0.8 2,474,752 - -1.5 2,474,767 + -1.1 2,474,788 - +0.6 2,474,969 - Dsui_2320 0.11 -0.5 2,475,103 - Dsui_2320 0.22 -1.0 2,475,220 + Dsui_2320 0.32 +0.7 2,475,376 + Dsui_2320 0.45 -0.3 2,475,532 + +0.9 2,475,598 + +0.1 2,475,631 + Dsui_2320 0.67 -0.2 2,475,698 + -0.4 2,475,734 + Dsui_2320 0.76 -0.1 2,475,830 + -0.7 2,475,911 - +0.1 2,475,981 - -1.1 2,475,981 - +0.7 2,476,020 + +0.2 2,476,020 + -0.1 2,476,028 - -0.5 2,476,038 - -0.3 2,476,051 - +0.2 2,476,134 + -0.7 2,476,344 - Dsui_2321 0.13 +0.4 2,476,763 - Dsui_2321 0.33 -0.8 2,476,937 - Dsui_2321 0.42 -1.0 2,476,985 + +1.3
Or see this region's nucleotide sequence