Experiment: Anaero. lactate (C), perchlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1019 and Dsui_1021 are separated by 796 nucleotides Dsui_1021 and Dsui_1022 are separated by 208 nucleotides
Dsui_1019: Dsui_1019 - transposase, at 1,051,587 to 1,052,387
_1019
Dsui_1021: Dsui_1021 - NAD(FAD)-dependent dehydrogenase, at 1,053,184 to 1,054,518
_1021
Dsui_1022: Dsui_1022 - cell division protein, at 1,054,727 to 1,055,632
_1022
Position (kb)
1053
1054
1055 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1052.745 kb on + strand at 1052.745 kb on + strand at 1052.745 kb on + strand at 1052.753 kb on - strand at 1052.753 kb on - strand at 1052.768 kb on + strand at 1052.789 kb on + strand at 1052.792 kb on - strand at 1052.797 kb on - strand at 1052.799 kb on - strand at 1053.005 kb on + strand at 1053.009 kb on + strand at 1053.028 kb on + strand at 1053.072 kb on - strand at 1053.091 kb on + strand at 1053.099 kb on + strand at 1053.115 kb on + strand at 1053.123 kb on - strand at 1053.173 kb on - strand at 1053.175 kb on + strand at 1053.175 kb on + strand at 1053.183 kb on - strand at 1053.287 kb on + strand at 1053.464 kb on + strand, within Dsui_1021 at 1053.494 kb on - strand, within Dsui_1021 at 1053.494 kb on - strand, within Dsui_1021 at 1053.617 kb on - strand, within Dsui_1021 at 1053.697 kb on - strand, within Dsui_1021 at 1053.821 kb on - strand, within Dsui_1021 at 1053.863 kb on - strand, within Dsui_1021 at 1053.893 kb on - strand, within Dsui_1021 at 1053.989 kb on + strand, within Dsui_1021 at 1053.997 kb on - strand, within Dsui_1021 at 1054.030 kb on + strand, within Dsui_1021 at 1054.061 kb on + strand, within Dsui_1021 at 1054.134 kb on + strand, within Dsui_1021 at 1054.276 kb on - strand, within Dsui_1021 at 1054.300 kb on - strand, within Dsui_1021 at 1054.418 kb on - strand at 1054.464 kb on - strand at 1054.527 kb on + strand at 1054.598 kb on + strand at 1054.611 kb on - strand at 1054.628 kb on + strand at 1054.750 kb on + strand at 1054.758 kb on - strand at 1054.761 kb on + strand at 1054.764 kb on - strand at 1054.764 kb on - strand at 1054.774 kb on - strand at 1054.818 kb on - strand, within Dsui_1022 at 1055.044 kb on - strand, within Dsui_1022 at 1055.167 kb on - strand, within Dsui_1022 at 1055.193 kb on - strand, within Dsui_1022 at 1055.193 kb on - strand, within Dsui_1022 at 1055.235 kb on - strand, within Dsui_1022 at 1055.442 kb on - strand, within Dsui_1022 at 1055.487 kb on - strand, within Dsui_1022
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor remove 1,052,745 + -0.0 1,052,745 + +0.4 1,052,745 + -1.4 1,052,753 - -0.1 1,052,753 - -0.0 1,052,768 + -0.1 1,052,789 + -0.1 1,052,792 - +0.7 1,052,797 - +0.1 1,052,799 - +0.1 1,053,005 + -0.6 1,053,009 + -0.4 1,053,028 + -0.8 1,053,072 - -1.0 1,053,091 + +0.1 1,053,099 + +0.5 1,053,115 + +0.5 1,053,123 - +0.2 1,053,173 - +0.2 1,053,175 + -0.1 1,053,175 + +0.5 1,053,183 - +0.0 1,053,287 + +0.1 1,053,464 + Dsui_1021 0.21 -0.1 1,053,494 - Dsui_1021 0.23 +0.3 1,053,494 - Dsui_1021 0.23 +0.4 1,053,617 - Dsui_1021 0.32 +0.0 1,053,697 - Dsui_1021 0.38 +0.9 1,053,821 - Dsui_1021 0.48 +0.2 1,053,863 - Dsui_1021 0.51 -0.4 1,053,893 - Dsui_1021 0.53 +0.1 1,053,989 + Dsui_1021 0.60 +0.5 1,053,997 - Dsui_1021 0.61 +0.4 1,054,030 + Dsui_1021 0.63 -0.8 1,054,061 + Dsui_1021 0.66 -0.6 1,054,134 + Dsui_1021 0.71 -0.8 1,054,276 - Dsui_1021 0.82 +0.1 1,054,300 - Dsui_1021 0.84 -0.0 1,054,418 - +0.4 1,054,464 - +0.1 1,054,527 + +1.0 1,054,598 + -0.7 1,054,611 - -0.2 1,054,628 + -3.2 1,054,750 + -2.1 1,054,758 - +0.5 1,054,761 + -0.5 1,054,764 - -0.4 1,054,764 - +0.4 1,054,774 - -0.5 1,054,818 - Dsui_1022 0.10 -0.5 1,055,044 - Dsui_1022 0.35 -1.4 1,055,167 - Dsui_1022 0.49 -1.0 1,055,193 - Dsui_1022 0.51 -1.4 1,055,193 - Dsui_1022 0.51 +0.6 1,055,235 - Dsui_1022 0.56 -2.1 1,055,442 - Dsui_1022 0.79 -2.0 1,055,487 - Dsui_1022 0.84 +1.5
Or see this region's nucleotide sequence