Experiment: Anaero. lactate (C), perchlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0696 and Dsui_0697 are separated by 80 nucleotides Dsui_0697 and Dsui_0698 are separated by 21 nucleotides Dsui_0698 and Dsui_0699 are separated by 16 nucleotides
Dsui_0696: Dsui_0696 - family 3 adenylate cyclase, at 691,562 to 692,464
_0696
Dsui_0697: Dsui_0697 - protein kinase family protein, at 692,545 to 694,881
_0697
Dsui_0698: Dsui_0698 - hypothetical protein, at 694,903 to 695,718
_0698
Dsui_0699: Dsui_0699 - hypothetical protein, at 695,735 to 696,406
_0699
Position (kb)
692
693
694
695 Strain fitness (log2 ratio)
-1
0
1
2 at 691.559 kb on + strand at 691.564 kb on + strand at 691.572 kb on - strand at 691.575 kb on + strand at 691.595 kb on - strand at 691.633 kb on + strand at 691.707 kb on - strand, within Dsui_0696 at 691.778 kb on - strand, within Dsui_0696 at 691.810 kb on - strand, within Dsui_0696 at 691.933 kb on + strand, within Dsui_0696 at 691.936 kb on - strand, within Dsui_0696 at 691.941 kb on - strand, within Dsui_0696 at 692.032 kb on + strand, within Dsui_0696 at 692.040 kb on - strand, within Dsui_0696 at 692.084 kb on + strand, within Dsui_0696 at 692.271 kb on - strand, within Dsui_0696 at 692.430 kb on + strand at 692.496 kb on + strand at 692.504 kb on - strand at 692.529 kb on + strand at 692.529 kb on + strand at 692.529 kb on + strand at 692.529 kb on + strand at 692.529 kb on + strand at 692.529 kb on + strand at 692.537 kb on - strand at 692.537 kb on - strand at 692.537 kb on - strand at 692.537 kb on - strand at 692.609 kb on + strand at 692.685 kb on - strand at 692.741 kb on - strand at 692.776 kb on - strand at 692.780 kb on - strand, within Dsui_0697 at 692.857 kb on - strand, within Dsui_0697 at 693.004 kb on + strand, within Dsui_0697 at 693.056 kb on - strand, within Dsui_0697 at 693.056 kb on - strand, within Dsui_0697 at 693.074 kb on + strand, within Dsui_0697 at 693.087 kb on - strand, within Dsui_0697 at 693.101 kb on - strand, within Dsui_0697 at 693.152 kb on - strand, within Dsui_0697 at 693.247 kb on + strand, within Dsui_0697 at 693.311 kb on + strand, within Dsui_0697 at 693.385 kb on + strand, within Dsui_0697 at 693.388 kb on - strand, within Dsui_0697 at 693.400 kb on + strand, within Dsui_0697 at 693.426 kb on + strand, within Dsui_0697 at 693.634 kb on - strand, within Dsui_0697 at 693.681 kb on - strand, within Dsui_0697 at 693.725 kb on - strand, within Dsui_0697 at 693.777 kb on + strand, within Dsui_0697 at 693.830 kb on + strand at 694.012 kb on - strand, within Dsui_0697 at 694.204 kb on + strand, within Dsui_0697 at 694.218 kb on + strand, within Dsui_0697 at 694.249 kb on - strand, within Dsui_0697 at 694.256 kb on - strand, within Dsui_0697 at 694.284 kb on - strand, within Dsui_0697 at 694.286 kb on + strand at 694.296 kb on + strand, within Dsui_0697 at 694.322 kb on + strand, within Dsui_0697 at 694.328 kb on - strand, within Dsui_0697 at 694.332 kb on + strand, within Dsui_0697 at 694.351 kb on - strand, within Dsui_0697 at 694.370 kb on - strand, within Dsui_0697 at 694.391 kb on - strand, within Dsui_0697 at 694.421 kb on + strand, within Dsui_0697 at 694.429 kb on - strand, within Dsui_0697 at 694.501 kb on + strand, within Dsui_0697 at 694.593 kb on - strand, within Dsui_0697 at 694.620 kb on - strand, within Dsui_0697 at 694.625 kb on + strand, within Dsui_0697 at 694.638 kb on - strand, within Dsui_0697 at 694.701 kb on + strand at 694.727 kb on - strand at 694.757 kb on + strand at 694.757 kb on + strand at 694.765 kb on - strand at 694.796 kb on - strand at 694.850 kb on - strand at 694.850 kb on - strand at 694.953 kb on + strand at 694.956 kb on - strand at 694.956 kb on - strand at 694.970 kb on - strand at 695.054 kb on + strand, within Dsui_0698 at 695.062 kb on - strand, within Dsui_0698 at 695.102 kb on + strand, within Dsui_0698 at 695.115 kb on - strand, within Dsui_0698 at 695.120 kb on - strand, within Dsui_0698 at 695.173 kb on - strand, within Dsui_0698 at 695.178 kb on - strand, within Dsui_0698 at 695.273 kb on + strand, within Dsui_0698 at 695.273 kb on + strand, within Dsui_0698 at 695.281 kb on - strand, within Dsui_0698 at 695.309 kb on + strand, within Dsui_0698 at 695.353 kb on - strand, within Dsui_0698 at 695.353 kb on - strand, within Dsui_0698 at 695.363 kb on + strand, within Dsui_0698 at 695.371 kb on - strand, within Dsui_0698 at 695.439 kb on + strand, within Dsui_0698 at 695.535 kb on - strand, within Dsui_0698 at 695.552 kb on + strand, within Dsui_0698 at 695.552 kb on + strand, within Dsui_0698 at 695.583 kb on - strand, within Dsui_0698 at 695.584 kb on - strand, within Dsui_0698 at 695.615 kb on - strand, within Dsui_0698 at 695.615 kb on - strand, within Dsui_0698 at 695.615 kb on - strand, within Dsui_0698 at 695.615 kb on - strand, within Dsui_0698 at 695.632 kb on + strand, within Dsui_0698 at 695.652 kb on - strand at 695.659 kb on + strand at 695.686 kb on + strand at 695.686 kb on + strand at 695.733 kb on - strand at 695.765 kb on - strand at 695.786 kb on - strand at 695.793 kb on + strand at 695.793 kb on + strand at 695.805 kb on + strand, within Dsui_0699 at 695.815 kb on + strand, within Dsui_0699 at 695.816 kb on + strand, within Dsui_0699 at 695.861 kb on - strand, within Dsui_0699 at 695.861 kb on - strand, within Dsui_0699 at 695.864 kb on + strand, within Dsui_0699
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor remove 691,559 + +0.8 691,564 + -0.5 691,572 - +0.3 691,575 + +0.7 691,595 - -0.2 691,633 + +1.4 691,707 - Dsui_0696 0.16 +1.2 691,778 - Dsui_0696 0.24 +0.2 691,810 - Dsui_0696 0.27 +0.6 691,933 + Dsui_0696 0.41 +0.4 691,936 - Dsui_0696 0.41 +1.9 691,941 - Dsui_0696 0.42 +0.6 692,032 + Dsui_0696 0.52 +0.1 692,040 - Dsui_0696 0.53 -0.4 692,084 + Dsui_0696 0.58 +0.1 692,271 - Dsui_0696 0.79 +1.2 692,430 + -0.7 692,496 + -0.7 692,504 - +0.0 692,529 + -1.3 692,529 + -1.1 692,529 + -0.9 692,529 + +0.8 692,529 + -0.9 692,529 + +0.5 692,537 - +0.1 692,537 - -0.6 692,537 - -0.4 692,537 - +1.3 692,609 + +0.7 692,685 - +0.6 692,741 - +0.3 692,776 - +0.2 692,780 - Dsui_0697 0.10 -0.5 692,857 - Dsui_0697 0.13 +0.5 693,004 + Dsui_0697 0.20 +0.2 693,056 - Dsui_0697 0.22 +0.7 693,056 - Dsui_0697 0.22 +0.3 693,074 + Dsui_0697 0.23 +0.4 693,087 - Dsui_0697 0.23 +0.9 693,101 - Dsui_0697 0.24 -0.1 693,152 - Dsui_0697 0.26 -0.0 693,247 + Dsui_0697 0.30 -0.4 693,311 + Dsui_0697 0.33 +1.1 693,385 + Dsui_0697 0.36 +0.6 693,388 - Dsui_0697 0.36 +0.9 693,400 + Dsui_0697 0.37 -1.3 693,426 + Dsui_0697 0.38 -0.1 693,634 - Dsui_0697 0.47 +0.5 693,681 - Dsui_0697 0.49 +0.6 693,725 - Dsui_0697 0.50 -0.5 693,777 + Dsui_0697 0.53 -0.5 693,830 + -0.7 694,012 - Dsui_0697 0.63 +0.2 694,204 + Dsui_0697 0.71 +0.3 694,218 + Dsui_0697 0.72 +0.2 694,249 - Dsui_0697 0.73 +0.7 694,256 - Dsui_0697 0.73 -0.2 694,284 - Dsui_0697 0.74 +0.2 694,286 + +0.9 694,296 + Dsui_0697 0.75 +0.0 694,322 + Dsui_0697 0.76 +0.5 694,328 - Dsui_0697 0.76 +0.3 694,332 + Dsui_0697 0.76 -0.1 694,351 - Dsui_0697 0.77 -0.9 694,370 - Dsui_0697 0.78 +0.5 694,391 - Dsui_0697 0.79 +1.1 694,421 + Dsui_0697 0.80 -1.1 694,429 - Dsui_0697 0.81 +0.7 694,501 + Dsui_0697 0.84 +0.3 694,593 - Dsui_0697 0.88 +0.4 694,620 - Dsui_0697 0.89 -0.9 694,625 + Dsui_0697 0.89 -0.1 694,638 - Dsui_0697 0.90 +0.4 694,701 + +0.4 694,727 - +0.3 694,757 + +0.5 694,757 + +0.6 694,765 - +0.3 694,796 - +0.3 694,850 - +0.4 694,850 - +0.1 694,953 + +1.0 694,956 - -0.7 694,956 - +0.0 694,970 - +0.5 695,054 + Dsui_0698 0.19 -0.6 695,062 - Dsui_0698 0.19 +0.3 695,102 + Dsui_0698 0.24 -0.6 695,115 - Dsui_0698 0.26 +0.4 695,120 - Dsui_0698 0.27 +0.0 695,173 - Dsui_0698 0.33 +0.6 695,178 - Dsui_0698 0.34 +0.7 695,273 + Dsui_0698 0.45 -1.2 695,273 + Dsui_0698 0.45 -0.2 695,281 - Dsui_0698 0.46 +0.3 695,309 + Dsui_0698 0.50 -0.9 695,353 - Dsui_0698 0.55 +0.3 695,353 - Dsui_0698 0.55 -0.3 695,363 + Dsui_0698 0.56 +0.2 695,371 - Dsui_0698 0.57 -0.9 695,439 + Dsui_0698 0.66 +0.3 695,535 - Dsui_0698 0.77 -0.0 695,552 + Dsui_0698 0.80 +1.0 695,552 + Dsui_0698 0.80 +0.1 695,583 - Dsui_0698 0.83 -0.6 695,584 - Dsui_0698 0.83 +0.4 695,615 - Dsui_0698 0.87 -0.3 695,615 - Dsui_0698 0.87 -0.3 695,615 - Dsui_0698 0.87 +0.5 695,615 - Dsui_0698 0.87 -0.3 695,632 + Dsui_0698 0.89 +1.1 695,652 - +0.3 695,659 + +0.8 695,686 + +0.1 695,686 + +0.5 695,733 - -0.0 695,765 - +0.4 695,786 - +0.0 695,793 + -0.6 695,793 + +0.1 695,805 + Dsui_0699 0.10 -0.4 695,815 + Dsui_0699 0.12 -0.6 695,816 + Dsui_0699 0.12 +2.2 695,861 - Dsui_0699 0.19 +0.2 695,861 - Dsui_0699 0.19 +0.5 695,864 + Dsui_0699 0.19 +0.5
Or see this region's nucleotide sequence