Experiment: Anaero. lactate (C), perchlorate electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0468 and Dsui_0469 overlap by 4 nucleotides Dsui_0469 and Dsui_0470 are separated by 31 nucleotides Dsui_0470 and Dsui_0471 overlap by 16 nucleotides
Dsui_0468: Dsui_0468 - glycosyltransferase, at 475,326 to 476,465
_0468
Dsui_0469: Dsui_0469 - lipopolysaccharide heptosyltransferase III, putative, at 476,462 to 477,565
_0469
Dsui_0470: Dsui_0470 - fructose-2,6-bisphosphatase, at 477,597 to 478,166
_0470
Dsui_0471: Dsui_0471 - cobalamin 5''-phosphate synthase/cobalamin synthase, at 478,151 to 478,927
_0471
Position (kb) 476
477
478 Strain fitness (log2 ratio) -1
0
1
2
3 at 475.590 kb on - strand, within Dsui_0468 at 477.003 kb on + strand at 477.052 kb on - strand, within Dsui_0469 at 477.113 kb on - strand, within Dsui_0469 at 477.165 kb on - strand, within Dsui_0469 at 477.463 kb on - strand at 477.688 kb on + strand, within Dsui_0470 at 477.696 kb on - strand, within Dsui_0470 at 477.696 kb on - strand, within Dsui_0470 at 477.798 kb on + strand at 477.918 kb on - strand, within Dsui_0470 at 477.995 kb on + strand, within Dsui_0470 at 478.134 kb on + strand at 478.169 kb on - strand at 478.169 kb on - strand at 478.199 kb on + strand at 478.325 kb on - strand, within Dsui_0471 at 478.341 kb on + strand at 478.442 kb on - strand, within Dsui_0471
Per-strain Table
Position Strand Gene LocusTag Fraction Anaero. lactate (C), perchlorate electron acceptor remove 475,590 - Dsui_0468 0.23 +2.9 477,003 + +0.9 477,052 - Dsui_0469 0.53 -0.4 477,113 - Dsui_0469 0.59 -0.9 477,165 - Dsui_0469 0.64 -0.5 477,463 - -0.2 477,688 + Dsui_0470 0.16 -0.6 477,696 - Dsui_0470 0.17 -0.0 477,696 - Dsui_0470 0.17 +0.4 477,798 + +0.9 477,918 - Dsui_0470 0.56 -0.2 477,995 + Dsui_0470 0.70 -1.2 478,134 + +3.5 478,169 - +1.4 478,169 - +0.2 478,199 + +0.4 478,325 - Dsui_0471 0.22 -0.0 478,341 + +1.9 478,442 - Dsui_0471 0.37 +0.6
Or see this region's nucleotide sequence