Strain Fitness in Shewanella oneidensis MR-1 around SO2172
Experiment: Fusidic 0.0625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Fusidic 0.0625 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,283,182 | - | +0.5 | |||
| 2,283,188 | + | +0.0 | |||
| 2,283,242 | - | +0.2 | |||
| 2,283,256 | - | +0.9 | |||
| 2,283,275 | - | -0.4 | |||
| 2,283,275 | - | -0.1 | |||
| 2,283,277 | - | +0.1 | |||
| 2,283,277 | - | +0.6 | |||
| 2,284,488 | + | +0.1 | |||
| 2,284,488 | + | +0.4 | |||
| 2,284,488 | + | +0.4 | |||
| 2,284,488 | + | -0.0 | |||
| 2,284,578 | + | +0.3 | |||
| 2,284,859 | + | +0.3 | |||
| 2,284,859 | + | +0.4 | |||
| 2,284,859 | + | +0.3 | |||
| 2,284,866 | + | +0.1 | |||
| 2,284,876 | - | -0.7 | |||
| 2,284,912 | - | -0.4 | |||
| 2,284,955 | + | -0.1 | |||
| 2,285,109 | + | +0.1 | |||
| 2,285,111 | + | +0.0 | |||
| 2,285,111 | + | +0.3 | |||
| 2,285,111 | + | -0.8 | |||
| 2,285,221 | + | SO2174 | 0.21 | +0.0 | |
| 2,285,346 | + | SO2174 | 0.34 | +0.2 | |
| 2,285,426 | - | SO2174 | 0.43 | +0.4 |
Or see this region's nucleotide sequence