Strain Fitness in Shewanella oneidensis MR-1 around SO2037

Experiment: Fusidic 0.0625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.0625 mg/ml
2,133,875	+				-0.0
2,134,109	-				+0.3
2,134,424	+		SO2037	0.33	+0.3
2,134,432	-		SO2037	0.34	+1.6
2,134,432	-		SO2037	0.34	+0.6
2,134,504	-		SO2037	0.41	+0.6
2,134,504	-		SO2037	0.41	+0.5
2,134,506	-		SO2037	0.41	-0.5
2,134,575	+		SO2037	0.49	-0.2
2,134,583	-		SO2037	0.49	+0.8
2,134,583	-		SO2037	0.49	-0.6
2,134,593	-		SO2037	0.50	+1.4
2,134,668	-		SO2037	0.58	+0.1
2,134,743	+		SO2037	0.66	+1.0
2,134,751	-		SO2037	0.67	+0.3
2,134,944	-		SO2037	0.87	-0.2
2,134,972	-		SO2037	0.90	+0.4
2,134,990	+				+0.8
2,135,013	-				-0.6
2,135,013	-				+0.0
2,135,013	-				-0.2
2,135,051	-				+0.2
2,135,154	-				-1.0
2,135,256	-				+0.1
2,135,694	+		SO2039	0.24	+0.3
2,135,704	+		SO2039	0.25	-0.0
2,135,704	+		SO2039	0.25	-0.1
2,135,704	+		SO2039	0.25	-0.7
2,135,704	+		SO2039	0.25	-0.9
2,135,707	-		SO2039	0.25	+0.1
2,135,712	-		SO2039	0.26	+0.0
2,135,712	-		SO2039	0.26	+0.3
2,135,712	-		SO2039	0.26	+0.7
2,135,799	-		SO2039	0.39	-0.1
2,135,803	-		SO2039	0.39	-0.2
2,135,804	-		SO2039	0.39	+0.2
2,135,964	+		SO2039	0.62	+0.6
2,135,972	-		SO2039	0.63	-0.4
2,135,972	-		SO2039	0.63	+0.6
2,136,033	+		SO2039	0.72	+0.8
2,136,066	-		SO2039	0.77	+0.5