Strain Fitness in Marinobacter adhaerens HP15 around HP15_898

Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_896 and HP15_897 are separated by 10 nucleotidesHP15_897 and HP15_898 are separated by 21 nucleotidesHP15_898 and HP15_899 are separated by 73 nucleotidesHP15_899 and HP15_900 are separated by 12 nucleotides HP15_896: HP15_896 - serine/threonine protein phosphatase, at 910,831 to 911,586 _896 HP15_897: HP15_897 - protein containing forkhead-associated domain, at 911,597 to 911,947 _897 HP15_898: HP15_898 - glutamine amidotransferase class-I, at 911,969 to 912,679 _898 HP15_899: HP15_899 - protein YeeN, at 912,753 to 913,478 _899 HP15_900: HP15_900 - hypothetical protein, at 913,491 to 913,652 _900 Position (kb) 911 912 913Strain fitness (log2 ratio) -2 -1 0 1 2at 911.264 kb on + strand, within HP15_896at 911.267 kb on - strand, within HP15_896at 911.270 kb on - strand, within HP15_896at 911.272 kb on + strand, within HP15_896at 911.280 kb on - strand, within HP15_896at 911.290 kb on - strand, within HP15_896at 911.338 kb on + strand, within HP15_896at 911.338 kb on + strand, within HP15_896at 911.343 kb on + strand, within HP15_896at 911.343 kb on + strandat 911.343 kb on + strand, within HP15_896at 911.351 kb on - strand, within HP15_896at 911.351 kb on - strand, within HP15_896at 911.363 kb on - strand, within HP15_896at 911.540 kb on - strandat 911.640 kb on + strand, within HP15_897at 911.734 kb on + strand, within HP15_897at 912.143 kb on - strand, within HP15_898at 912.184 kb on - strand, within HP15_898at 912.317 kb on + strand, within HP15_898at 912.367 kb on - strand, within HP15_898at 912.369 kb on + strand, within HP15_898at 912.496 kb on + strand, within HP15_898at 912.598 kb on + strand, within HP15_898at 913.088 kb on - strand, within HP15_899at 913.102 kb on + strand, within HP15_899at 913.161 kb on + strand, within HP15_899at 913.223 kb on - strand, within HP15_899at 913.261 kb on + strand, within HP15_899at 913.269 kb on - strand, within HP15_899at 913.312 kb on + strand, within HP15_899at 913.348 kb on - strand, within HP15_899at 913.350 kb on + strand, within HP15_899at 913.406 kb on - strandat 913.416 kb on - strandat 913.558 kb on + strand, within HP15_900at 913.627 kb on - strand, within HP15_900at 913.660 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol%
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911,264 + HP15_896 0.57 +0.6
911,267 - HP15_896 0.58 +0.6
911,270 - HP15_896 0.58 -0.0
911,272 + HP15_896 0.58 -0.4
911,280 - HP15_896 0.59 +1.8
911,290 - HP15_896 0.61 -0.1
911,338 + HP15_896 0.67 -0.3
911,338 + HP15_896 0.67 -0.2
911,343 + HP15_896 0.68 +0.5
911,343 + -0.5
911,343 + HP15_896 0.68 +0.0
911,351 - HP15_896 0.69 +0.5
911,351 - HP15_896 0.69 +0.2
911,363 - HP15_896 0.70 -0.2
911,540 - +0.3
911,640 + HP15_897 0.12 -0.3
911,734 + HP15_897 0.39 -0.0
912,143 - HP15_898 0.24 +0.3
912,184 - HP15_898 0.30 +0.8
912,317 + HP15_898 0.49 +0.6
912,367 - HP15_898 0.56 +0.9
912,369 + HP15_898 0.56 +0.5
912,496 + HP15_898 0.74 -1.8
912,598 + HP15_898 0.88 +1.1
913,088 - HP15_899 0.46 +0.5
913,102 + HP15_899 0.48 +0.2
913,161 + HP15_899 0.56 +0.7
913,223 - HP15_899 0.65 -0.1
913,261 + HP15_899 0.70 +1.5
913,269 - HP15_899 0.71 -0.9
913,312 + HP15_899 0.77 +0.7
913,348 - HP15_899 0.82 +0.1
913,350 + HP15_899 0.82 +0.3
913,406 - -0.1
913,416 - -0.4
913,558 + HP15_900 0.41 +0.0
913,627 - HP15_900 0.84 +0.2
913,660 + +0.1

Or see this region's nucleotide sequence