Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3336 and HP15_3337 are separated by 157 nucleotides HP15_3337 and HP15_3338 are separated by 272 nucleotides HP15_3338 and HP15_3339 are separated by 2 nucleotides
HP15_3336: HP15_3336 - lipase chaperone, at 3,498,158 to 3,499,180
_3336
HP15_3337: HP15_3337 - delta-aminolevulinic acid dehydratase, at 3,499,338 to 3,499,559
_3337
HP15_3338: HP15_3338 - transcriptional regulator, TetR family, at 3,499,832 to 3,500,464
_3338
HP15_3339: HP15_3339 - acyl-CoA dehydrogenase domain protein, at 3,500,467 to 3,502,167
_3339
Position (kb)
3499
3500 Strain fitness (log2 ratio)
-1
0
1
2 at 3498.435 kb on - strand, within HP15_3336 at 3498.455 kb on - strand, within HP15_3336 at 3498.473 kb on - strand, within HP15_3336 at 3498.630 kb on - strand, within HP15_3336 at 3498.653 kb on - strand, within HP15_3336 at 3498.671 kb on + strand, within HP15_3336 at 3498.707 kb on + strand, within HP15_3336 at 3498.759 kb on - strand, within HP15_3336 at 3498.926 kb on - strand, within HP15_3336 at 3498.976 kb on - strand, within HP15_3336 at 3499.032 kb on + strand, within HP15_3336 at 3499.112 kb on - strand at 3499.142 kb on - strand at 3499.277 kb on + strand at 3499.327 kb on + strand at 3499.404 kb on - strand, within HP15_3337 at 3499.470 kb on - strand, within HP15_3337 at 3499.512 kb on + strand, within HP15_3337 at 3499.529 kb on + strand, within HP15_3337 at 3499.529 kb on + strand, within HP15_3337 at 3499.529 kb on + strand, within HP15_3337 at 3499.537 kb on - strand at 3499.537 kb on - strand at 3499.638 kb on - strand at 3499.899 kb on + strand, within HP15_3338 at 3500.001 kb on + strand, within HP15_3338 at 3500.007 kb on + strand, within HP15_3338 at 3500.072 kb on + strand, within HP15_3338 at 3500.080 kb on - strand, within HP15_3338 at 3500.086 kb on - strand, within HP15_3338 at 3500.229 kb on + strand, within HP15_3338 at 3500.297 kb on + strand, within HP15_3338 at 3500.305 kb on - strand, within HP15_3338
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 3,498,435 - HP15_3336 0.27 +1.9 3,498,455 - HP15_3336 0.29 +0.0 3,498,473 - HP15_3336 0.31 +0.9 3,498,630 - HP15_3336 0.46 +0.6 3,498,653 - HP15_3336 0.48 +0.1 3,498,671 + HP15_3336 0.50 +0.7 3,498,707 + HP15_3336 0.54 +0.4 3,498,759 - HP15_3336 0.59 -0.3 3,498,926 - HP15_3336 0.75 -1.7 3,498,976 - HP15_3336 0.80 -0.1 3,499,032 + HP15_3336 0.85 +0.2 3,499,112 - -0.5 3,499,142 - +0.1 3,499,277 + -0.2 3,499,327 + -0.4 3,499,404 - HP15_3337 0.30 -0.2 3,499,470 - HP15_3337 0.59 -0.3 3,499,512 + HP15_3337 0.78 -1.3 3,499,529 + HP15_3337 0.86 -0.3 3,499,529 + HP15_3337 0.86 -0.6 3,499,529 + HP15_3337 0.86 -0.2 3,499,537 - -0.1 3,499,537 - -0.6 3,499,638 - -0.4 3,499,899 + HP15_3338 0.11 +0.4 3,500,001 + HP15_3338 0.27 -0.6 3,500,007 + HP15_3338 0.28 -0.1 3,500,072 + HP15_3338 0.38 +1.3 3,500,080 - HP15_3338 0.39 +0.5 3,500,086 - HP15_3338 0.40 +0.8 3,500,229 + HP15_3338 0.63 +0.2 3,500,297 + HP15_3338 0.73 +1.3 3,500,305 - HP15_3338 0.75 +1.4
Or see this region's nucleotide sequence