Strain Fitness in Marinobacter adhaerens HP15 around HP15_1741

Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1739 and HP15_1740 are separated by 53 nucleotidesHP15_1740 and HP15_1741 are separated by 38 nucleotidesHP15_1741 and HP15_1742 are separated by 245 nucleotides HP15_1739: HP15_1739 - membrane protein containing DUF6, transmembrane, at 1,836,447 to 1,837,325 _1739 HP15_1740: HP15_1740 - enoyl-CoA hydratase/isomerase, at 1,837,379 to 1,838,182 _1740 HP15_1741: HP15_1741 - hypothetical protein, at 1,838,221 to 1,838,583 _1741 HP15_1742: HP15_1742 - secreted protein, at 1,838,829 to 1,839,464 _1742 Position (kb) 1838 1839Strain fitness (log2 ratio) -2 -1 0 1 2at 1837.333 kb on - strandat 1837.442 kb on + strandat 1837.487 kb on - strand, within HP15_1740at 1837.487 kb on - strand, within HP15_1740at 1837.518 kb on + strand, within HP15_1740at 1837.781 kb on + strand, within HP15_1740at 1837.789 kb on - strand, within HP15_1740at 1837.789 kb on - strand, within HP15_1740at 1837.819 kb on + strand, within HP15_1740at 1837.820 kb on - strand, within HP15_1740at 1837.890 kb on + strand, within HP15_1740at 1837.954 kb on - strand, within HP15_1740at 1838.075 kb on - strand, within HP15_1740at 1838.075 kb on - strand, within HP15_1740at 1838.112 kb on - strandat 1838.127 kb on + strandat 1838.135 kb on - strandat 1838.368 kb on - strand, within HP15_1741at 1838.450 kb on - strand, within HP15_1741at 1838.614 kb on + strandat 1838.617 kb on - strandat 1838.642 kb on - strandat 1838.658 kb on + strandat 1838.790 kb on + strandat 1838.940 kb on - strand, within HP15_1742at 1838.940 kb on - strand, within HP15_1742at 1839.208 kb on - strand, within HP15_1742at 1839.220 kb on + strand, within HP15_1742at 1839.340 kb on + strand, within HP15_1742at 1839.376 kb on + strand, within HP15_1742at 1839.417 kb on - strandat 1839.425 kb on + strandat 1839.433 kb on - strandat 1839.507 kb on + strandat 1839.525 kb on - strandat 1839.562 kb on + strandat 1839.562 kb on + strandat 1839.570 kb on - strandat 1839.570 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol%
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1,837,333 - -0.8
1,837,442 + -0.3
1,837,487 - HP15_1740 0.13 -0.5
1,837,487 - HP15_1740 0.13 -1.2
1,837,518 + HP15_1740 0.17 +0.3
1,837,781 + HP15_1740 0.50 +0.5
1,837,789 - HP15_1740 0.51 +0.3
1,837,789 - HP15_1740 0.51 -0.8
1,837,819 + HP15_1740 0.55 +1.2
1,837,820 - HP15_1740 0.55 -0.5
1,837,890 + HP15_1740 0.64 -0.8
1,837,954 - HP15_1740 0.72 -0.6
1,838,075 - HP15_1740 0.87 -0.8
1,838,075 - HP15_1740 0.87 +0.8
1,838,112 - +0.1
1,838,127 + +0.9
1,838,135 - -1.4
1,838,368 - HP15_1741 0.40 +0.1
1,838,450 - HP15_1741 0.63 +0.4
1,838,614 + +2.5
1,838,617 - -0.0
1,838,642 - -0.6
1,838,658 + +2.3
1,838,790 + -0.6
1,838,940 - HP15_1742 0.17 +0.0
1,838,940 - HP15_1742 0.17 +0.5
1,839,208 - HP15_1742 0.60 -1.1
1,839,220 + HP15_1742 0.61 -2.5
1,839,340 + HP15_1742 0.80 -0.2
1,839,376 + HP15_1742 0.86 -0.9
1,839,417 - -0.7
1,839,425 + +0.4
1,839,433 - -0.2
1,839,507 + -1.7
1,839,525 - +0.2
1,839,562 + +1.7
1,839,562 + +1.0
1,839,570 - -1.2
1,839,570 - -0.2

Or see this region's nucleotide sequence