Experiment: m.b. Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1384 and HP15_1385 are separated by 95 nucleotides HP15_1385 and HP15_1386 overlap by 1 nucleotides HP15_1386 and HP15_1387 are separated by 12 nucleotides HP15_1387 and HP15_1388 are separated by 168 nucleotides
HP15_1384: HP15_1384 - lipolytic enzyme, G-D-S-L, at 1,459,300 to 1,459,887
_1384
HP15_1385: HP15_1385 - ABC transporter ATP-binding protein-like protein, at 1,459,983 to 1,460,711
_1385
HP15_1386: HP15_1386 - ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component, at 1,460,711 to 1,463,197
_1386
HP15_1387: HP15_1387 - ABC-type amino acid transport/signal transduction system, periplasmic domain protein, at 1,463,210 to 1,463,992
_1387
HP15_1388: HP15_1388 - iron-containing alcohol dehydrogenase, at 1,464,161 to 1,465,348
_1388
Position (kb) 1460
1461
1462
1463
1464 Strain fitness (log2 ratio) -1
0
1
2
3 at 1459.741 kb on + strand, within HP15_1384 at 1459.806 kb on - strand, within HP15_1384 at 1459.810 kb on + strand, within HP15_1384 at 1459.906 kb on + strand at 1459.920 kb on - strand at 1460.092 kb on + strand, within HP15_1385 at 1460.151 kb on + strand, within HP15_1385 at 1460.187 kb on + strand, within HP15_1385 at 1460.229 kb on - strand, within HP15_1385 at 1460.248 kb on - strand, within HP15_1385 at 1460.409 kb on - strand, within HP15_1385 at 1460.426 kb on - strand, within HP15_1385 at 1460.431 kb on + strand, within HP15_1385 at 1460.591 kb on + strand, within HP15_1385 at 1460.601 kb on - strand, within HP15_1385 at 1460.627 kb on + strand, within HP15_1385 at 1460.691 kb on + strand at 1460.691 kb on + strand at 1460.814 kb on + strand at 1460.990 kb on + strand, within HP15_1386 at 1461.084 kb on - strand, within HP15_1386 at 1461.402 kb on - strand, within HP15_1386 at 1461.527 kb on + strand, within HP15_1386 at 1461.549 kb on + strand, within HP15_1386 at 1461.557 kb on - strand, within HP15_1386 at 1461.637 kb on + strand, within HP15_1386 at 1461.795 kb on - strand, within HP15_1386 at 1461.836 kb on + strand, within HP15_1386 at 1462.012 kb on + strand, within HP15_1386 at 1462.071 kb on - strand, within HP15_1386 at 1462.183 kb on - strand, within HP15_1386 at 1462.446 kb on + strand, within HP15_1386 at 1462.458 kb on - strand, within HP15_1386 at 1462.526 kb on - strand, within HP15_1386 at 1462.562 kb on - strand, within HP15_1386 at 1462.656 kb on + strand, within HP15_1386 at 1462.697 kb on - strand, within HP15_1386 at 1463.072 kb on - strand at 1463.250 kb on + strand at 1463.319 kb on - strand, within HP15_1387 at 1463.443 kb on + strand, within HP15_1387 at 1463.451 kb on - strand, within HP15_1387 at 1463.476 kb on + strand, within HP15_1387 at 1463.675 kb on + strand, within HP15_1387 at 1463.683 kb on - strand, within HP15_1387 at 1463.692 kb on - strand, within HP15_1387 at 1463.751 kb on + strand, within HP15_1387 at 1463.827 kb on - strand, within HP15_1387 at 1463.887 kb on + strand, within HP15_1387 at 1463.887 kb on + strand, within HP15_1387 at 1463.887 kb on + strand, within HP15_1387 at 1464.002 kb on - strand at 1464.176 kb on + strand at 1464.176 kb on + strand at 1464.184 kb on - strand at 1464.184 kb on - strand at 1464.184 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 7.5 vol% remove 1,459,741 + HP15_1384 0.75 +1.5 1,459,806 - HP15_1384 0.86 -0.3 1,459,810 + HP15_1384 0.87 -0.8 1,459,906 + +0.3 1,459,920 - +0.9 1,460,092 + HP15_1385 0.15 +0.9 1,460,151 + HP15_1385 0.23 -0.1 1,460,187 + HP15_1385 0.28 -0.7 1,460,229 - HP15_1385 0.34 -0.2 1,460,248 - HP15_1385 0.36 +2.5 1,460,409 - HP15_1385 0.58 -0.4 1,460,426 - HP15_1385 0.61 -0.1 1,460,431 + HP15_1385 0.61 -0.4 1,460,591 + HP15_1385 0.83 +0.6 1,460,601 - HP15_1385 0.85 +0.5 1,460,627 + HP15_1385 0.88 +0.4 1,460,691 + -0.4 1,460,691 + -0.1 1,460,814 + +1.8 1,460,990 + HP15_1386 0.11 +0.4 1,461,084 - HP15_1386 0.15 +2.9 1,461,402 - HP15_1386 0.28 +0.5 1,461,527 + HP15_1386 0.33 +0.9 1,461,549 + HP15_1386 0.34 +1.0 1,461,557 - HP15_1386 0.34 +0.9 1,461,637 + HP15_1386 0.37 +3.7 1,461,795 - HP15_1386 0.44 -0.1 1,461,836 + HP15_1386 0.45 -0.2 1,462,012 + HP15_1386 0.52 -0.0 1,462,071 - HP15_1386 0.55 -0.5 1,462,183 - HP15_1386 0.59 -0.3 1,462,446 + HP15_1386 0.70 +0.9 1,462,458 - HP15_1386 0.70 +0.9 1,462,526 - HP15_1386 0.73 -0.6 1,462,562 - HP15_1386 0.74 +0.5 1,462,656 + HP15_1386 0.78 +0.6 1,462,697 - HP15_1386 0.80 +0.0 1,463,072 - -0.1 1,463,250 + +0.3 1,463,319 - HP15_1387 0.14 +0.2 1,463,443 + HP15_1387 0.30 +0.3 1,463,451 - HP15_1387 0.31 -1.1 1,463,476 + HP15_1387 0.34 +2.2 1,463,675 + HP15_1387 0.59 +0.9 1,463,683 - HP15_1387 0.60 -0.1 1,463,692 - HP15_1387 0.62 +0.1 1,463,751 + HP15_1387 0.69 -0.3 1,463,827 - HP15_1387 0.79 -0.2 1,463,887 + HP15_1387 0.86 -0.1 1,463,887 + HP15_1387 0.86 +0.3 1,463,887 + HP15_1387 0.86 +0.9 1,464,002 - +0.2 1,464,176 + +0.2 1,464,176 + +0.3 1,464,184 - +0.6 1,464,184 - +1.0 1,464,184 - +0.7
Or see this region's nucleotide sequence