Strain Fitness in Dechlorosoma suillum PS around Dsui_3535

Experiment: R2A with sodium pyruvate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_3534 and Dsui_3535 overlap by 4 nucleotidesDsui_3535 and Dsui_3536 are separated by 101 nucleotides Dsui_3534: Dsui_3534 - putative permease, at 3,799,240 to 3,800,346 _3534 Dsui_3535: Dsui_3535 - putative permease, at 3,800,343 to 3,801,428 _3535 Dsui_3536: Dsui_3536 - leucyl aminopeptidase, at 3,801,530 to 3,803,026 _3536 Position (kb) 3800 3801 3802Strain fitness (log2 ratio) -1 0 1 2at 3801.437 kb on - strandat 3801.613 kb on + strandat 3801.629 kb on + strandat 3801.682 kb on + strand, within Dsui_3536at 3801.709 kb on + strand, within Dsui_3536at 3801.751 kb on + strand, within Dsui_3536at 3801.817 kb on + strand, within Dsui_3536at 3801.837 kb on - strand, within Dsui_3536at 3802.330 kb on + strand, within Dsui_3536

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A with sodium pyruvate
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3,801,437 - -0.4
3,801,613 + -0.9
3,801,629 + +0.1
3,801,682 + Dsui_3536 0.10 -1.7
3,801,709 + Dsui_3536 0.12 +0.8
3,801,751 + Dsui_3536 0.15 -0.5
3,801,817 + Dsui_3536 0.19 -0.9
3,801,837 - Dsui_3536 0.21 +1.8
3,802,330 + Dsui_3536 0.53 -0.3

Or see this region's nucleotide sequence