Strain Fitness in Dechlorosoma suillum PS around Dsui_2023

Experiment: R2A with sodium pyruvate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with sodium pyruvate
2,138,101	+				+2.2
2,138,101	+		Dsui_2022	0.68	-0.5
2,138,101	+		Dsui_2022	0.68	-0.4
2,138,101	+		Dsui_2022	0.68	+0.5
2,138,109	-		Dsui_2022	0.69	+0.0
2,138,117	+		Dsui_2022	0.70	+0.7
2,138,124	-		Dsui_2022	0.71	+1.0
2,138,124	-		Dsui_2022	0.71	-0.4
2,138,125	-		Dsui_2022	0.71	-0.6
2,138,136	+		Dsui_2022	0.72	-0.9
2,138,144	-		Dsui_2022	0.73	+0.4
2,138,177	+		Dsui_2022	0.77	-1.0
2,138,178	+		Dsui_2022	0.78	+1.3
2,138,183	+		Dsui_2022	0.78	+1.3
2,138,183	+		Dsui_2022	0.78	+0.9
2,138,183	+				+0.2
2,138,183	+		Dsui_2022	0.78	-0.1
2,138,183	+				+3.5
2,138,183	+		Dsui_2022	0.78	-0.7
2,138,183	+		Dsui_2022	0.78	-1.3
2,138,183	+		Dsui_2022	0.78	+0.7
2,138,183	+		Dsui_2022	0.78	+0.2
2,138,183	+		Dsui_2022	0.78	+1.3
2,138,183	+		Dsui_2022	0.78	+0.4
2,138,183	+		Dsui_2022	0.78	-1.1
2,138,183	+		Dsui_2022	0.78	+0.6
2,138,183	+				+2.5
2,138,183	+				+0.9
2,138,183	+				+0.2
2,138,183	+				+0.5
2,138,183	+		Dsui_2022	0.78	-1.0
2,138,191	+		Dsui_2022	0.79	-0.7
2,138,191	-		Dsui_2022	0.79	-0.7
2,138,191	-		Dsui_2022	0.79	-0.1
2,138,191	-		Dsui_2022	0.79	-0.0
2,138,191	-		Dsui_2022	0.79	+0.2
2,138,191	-				+1.3
2,138,191	-		Dsui_2022	0.79	-0.5
2,138,191	-		Dsui_2022	0.79	-0.0
2,138,191	-		Dsui_2022	0.79	-0.6
2,138,191	-		Dsui_2022	0.79	+0.1
2,138,191	-		Dsui_2022	0.79	+0.6
2,138,191	-		Dsui_2022	0.79	-0.4
2,138,191	-		Dsui_2022	0.79	-0.4
2,138,191	-		Dsui_2022	0.79	-0.1
2,138,191	-		Dsui_2022	0.79	+0.3
2,138,191	-		Dsui_2022	0.79	-0.1
2,138,191	-		Dsui_2022	0.79	-0.7
2,138,191	-		Dsui_2022	0.79	-0.4
2,138,191	-		Dsui_2022	0.79	-0.5
2,138,191	-		Dsui_2022	0.79	+0.4
2,138,191	-		Dsui_2022	0.79	+0.7
2,138,191	-		Dsui_2022	0.79	+0.5
2,138,191	-		Dsui_2022	0.79	+0.7
2,138,191	-		Dsui_2022	0.79	+0.4
2,138,191	-		Dsui_2022	0.79	+0.4
2,138,191	-		Dsui_2022	0.79	+0.1
2,138,192	+		Dsui_2022	0.79	-0.7
2,138,193	-		Dsui_2022	0.80	-0.1
2,138,195	-		Dsui_2022	0.80	-0.5
2,138,196	-				+1.2
2,138,200	-		Dsui_2022	0.80	+0.3
2,138,209	+		Dsui_2022	0.82	-0.9
2,138,209	+				+2.5
2,138,209	+		Dsui_2022	0.82	+0.7
2,138,209	+		Dsui_2022	0.82	-0.9
2,138,217	-		Dsui_2022	0.83	-0.1
2,138,217	-		Dsui_2022	0.83	-0.4
2,138,217	-		Dsui_2022	0.83	-0.6
2,138,217	-		Dsui_2022	0.83	-0.1
2,138,217	-		Dsui_2022	0.83	-0.1
2,138,218	-		Dsui_2022	0.83	+0.1
2,138,224	+		Dsui_2022	0.84	+1.7
2,138,235	+				+1.9
2,138,235	+		Dsui_2022	0.85	+1.2
2,138,235	+				+1.5
2,138,235	+				+0.2
2,138,243	+		Dsui_2022	0.86	-1.2
2,138,243	-		Dsui_2022	0.86	-0.2
2,138,243	-		Dsui_2022	0.86	+0.0
2,138,243	-		Dsui_2022	0.86	-0.9
2,138,243	-		Dsui_2022	0.86	+0.3
2,138,243	-		Dsui_2022	0.86	-0.1
2,138,243	-		Dsui_2022	0.86	+0.8
2,138,243	-		Dsui_2022	0.86	+0.1
2,138,248	-		Dsui_2022	0.87	-1.2
2,138,252	-		Dsui_2022	0.87	+1.5
2,138,252	-		Dsui_2022	0.87	-0.5
2,138,254	+		Dsui_2022	0.88	-2.9
2,138,277	-				-0.8
2,138,278	-				-0.8
2,138,285	-				-0.6
2,138,289	+				+1.2
2,138,289	+				+0.9
2,138,289	+				+0.5
2,138,290	+				-0.5
2,138,297	-				+0.2
2,138,298	-				-0.2
2,138,299	+				+0.5
2,138,301	-				-0.5
2,138,305	-				-0.3
2,138,315	-				-0.4
2,138,316	+				+0.1
2,138,316	+				+0.2
2,138,321	+				+0.2
2,138,321	+				-0.1
2,138,321	+				+0.4
2,138,324	+				-2.2
2,138,324	+				+1.9
2,138,324	+				-0.3
2,138,324	-				+0.2
2,138,324	-				+1.0
2,138,329	-				+0.0
2,138,329	-				-0.2
2,138,329	-				-0.4
2,138,329	-				+0.2
2,138,329	-				-0.3
2,138,329	-				+0.8
2,138,329	-				+0.2
2,138,329	-				+0.5
2,138,330	+				-0.8
2,138,330	+				+0.2
2,138,330	+				+2.5
2,138,332	-				+0.4
2,138,332	-				+0.7
2,138,333	-				-0.9
2,138,338	-				+0.1
2,138,340	-				-1.0
2,138,340	-				-1.7
2,138,342	+				+1.0
2,138,342	+				+0.5
2,138,342	+				+0.6
2,138,342	+				-0.2
2,138,342	+				+2.5
2,138,342	+				+0.5
2,138,342	+				+0.3
2,138,342	+				-1.2
2,138,342	+				-2.5
2,138,342	+				+0.6
2,138,342	+				+0.9
2,138,342	+				+0.6
2,138,342	+				+0.2
2,138,342	+				+0.6
2,138,342	+				-1.2
2,138,342	+				+1.3
2,138,342	+				+0.3
2,138,342	+				-0.2
2,138,342	+				-0.8
2,138,342	+				+1.5
2,138,342	+				+1.1
2,138,342	+				+1.5
2,138,342	+				-1.2
2,138,342	+				-1.1
2,138,342	+				+1.0
2,138,342	+				-0.3
2,138,342	+				+1.5
2,138,342	+				-0.8
2,138,342	+				-1.0
2,138,342	+				+1.1
2,138,342	+				+1.3
2,138,342	+				+0.2
2,138,342	+				+1.5
2,138,342	-				+0.3
2,138,342	-				+0.2
2,138,342	-				-0.5
2,138,344	+				+3.1
2,138,345	-				+0.6
2,138,350	-				-0.3
2,138,350	-				-0.7
2,138,350	-				-0.1
2,138,350	-				+0.0
2,138,350	-				-0.7
2,138,350	-				+0.3
2,138,350	-				-0.2
2,138,350	-				+0.0
2,138,350	-				-0.6
2,138,350	-				-0.1
2,138,350	-				-0.1
2,138,350	-				-0.0
2,138,350	-				+0.9
2,138,350	-				+0.3
2,138,350	-				-0.3
2,138,350	-				-0.6
2,138,350	-				-0.9
2,138,350	-				-0.1
2,138,350	-				-0.5
2,138,350	-				+0.5
2,138,350	-				-0.1
2,138,350	-				-0.3
2,138,350	-				-0.5
2,138,350	-				+0.9
2,138,350	-				-0.1
2,138,350	-				+0.1
2,138,350	-				-0.3
2,138,350	-				+0.2
2,138,350	-				-0.8
2,138,350	-				-0.3
2,138,350	-				-1.8
2,138,350	-				-0.5
2,138,350	-				-0.1
2,138,350	-				-1.6
2,138,350	-				-0.7
2,138,350	-				+0.6
2,138,350	-				-0.6
2,138,350	-				-0.3
2,138,350	-				+0.5
2,138,350	-				-0.3
2,138,350	-				-0.5
2,138,350	-				+1.9
2,138,350	-				-1.8
2,138,350	-				-0.4
2,138,350	-				+0.6
2,138,350	-				+0.8
2,138,350	-				-0.4
2,138,350	-				-0.2
2,138,350	-				-0.9
2,138,350	-				-0.4
2,138,350	-				+0.4
2,138,350	-				+0.2
2,138,350	-				-0.5
2,138,350	-				-0.2
2,138,350	-				+0.6
2,138,350	-				+0.3
2,138,350	-				-1.3
2,138,350	-				+0.4
2,138,350	-				-0.1
2,138,350	-				-0.1
2,138,350	-				-0.3
2,138,350	-				+0.4
2,138,350	-				+0.1
2,138,350	-				+1.0
2,138,352	+				+0.9
2,138,352	-				-0.8
2,138,352	-				-0.1
2,138,369	-				+0.1
2,138,379	+				+0.2
2,138,384	+				+0.2
2,138,384	+				+0.5
2,138,387	-				-0.6
2,138,387	-				+0.4
2,138,392	-				-0.4
2,138,394	-				-0.6
2,138,396	+				+1.5
2,138,396	+				+1.2
2,138,396	+				-1.8
2,138,404	-				-0.0
2,138,404	-				-0.2
2,138,404	-				-2.2
2,138,404	-				-1.0
2,138,406	+				+0.5
2,138,406	+				+0.2
2,138,406	+				-0.5
2,138,406	+				-1.0
2,138,406	+				+0.7
2,138,406	+				+0.4
2,138,406	+				-0.3
2,138,406	+				-0.3
2,138,406	+				+1.3
2,138,406	+				+1.2
2,138,406	+				-0.3
2,138,414	-				+0.7
2,138,414	-				+0.5
2,138,414	-				-1.2
2,138,414	-				+0.2
2,138,414	-				+0.2
2,138,414	-				-1.1
2,138,414	-				+0.7
2,138,414	-				-0.1
2,138,414	-				+0.1
2,138,414	-				-1.4
2,138,414	-				-0.5
2,138,414	-				-0.7
2,138,414	-				-0.9
2,138,414	-				+0.2
2,138,414	-				-0.4
2,138,414	-				-0.2
2,138,414	-				-1.2
2,138,414	-				-0.1
2,138,414	-				+0.7
2,138,414	-				-0.6
2,138,414	-				+0.1
2,138,414	-				+3.5
2,138,414	-				+1.2
2,138,414	-				+0.1
2,138,415	+				-0.7
2,138,420	+				+0.3
2,138,420	+				-0.6
2,138,420	+				-0.2
2,138,420	+				-1.3
2,138,420	+				+1.9
2,138,423	+				+0.5
2,138,423	-				+0.2
2,138,423	-				-1.5
2,138,428	-				+2.5
2,138,459	-				+0.3
2,138,465	-				-1.0
2,138,467	+				+0.9
2,138,468	+				+0.5
2,138,474	+				+1.9
2,138,476	-				-0.3
2,138,476	-				+0.3
2,138,476	-				-0.3
2,138,476	-				+0.1
2,138,478	-				+0.4
2,138,481	+				-0.3
2,138,481	+				-0.3
2,138,482	-				-0.7
2,138,482	-				+0.4
2,138,482	-				+0.1
2,138,482	-				+1.4
2,138,483	-				-0.9
2,138,489	-				-0.4
2,138,489	-				+1.5
2,138,492	+				+1.2
2,138,499	-				-0.1
2,138,499	-				+0.2
2,138,500	-				+0.6
2,138,500	-				-0.4
2,138,512	-				+0.1
2,138,536	-				-0.1
2,138,538	+				+0.2
2,138,545	+				+2.5
2,138,546	-				-0.2
2,138,546	-				+0.3
2,138,561	-				-0.5
2,138,565	+				+0.5
2,138,568	+				+0.7
2,138,573	+				-0.5
2,138,573	+				+1.5
2,138,576	-				+0.2
2,138,581	-				+0.1
2,138,581	-				+0.3
2,138,582	-				-0.5
2,138,624	+				+2.5
2,138,634	+				+2.5
2,138,634	+				+0.9
2,138,634	+				+1.1
2,138,634	+				-1.9
2,138,634	+				-0.6
2,138,634	+				+0.7
2,138,634	+				+1.2
2,138,634	+				+0.5
2,138,642	-				-0.3
2,138,642	-				-0.9
2,138,642	-				+0.9
2,138,642	-				-0.1
2,138,642	-				-0.8
2,138,642	-				-0.2
2,138,642	-				+0.1
2,138,642	-				-0.1
2,138,642	-				-2.2
2,138,642	-				-0.5
2,138,644	+				+0.9
2,138,644	+				+0.7
2,138,644	+				-0.1
2,138,644	+				+0.2
2,138,644	+				-0.5
2,138,644	+				-0.3
2,138,644	+				+0.2
2,138,644	+				-1.1
2,138,644	+				+1.7
2,138,644	+				+1.2
2,138,650	-				+0.9
2,138,652	-				-0.9
2,138,652	-				+0.5
2,138,652	-				+0.3
2,138,652	-				+0.5
2,138,652	-				+0.9
2,138,652	-				+0.0
2,138,652	-				-0.3
2,138,652	-				+0.3
2,138,652	-				-0.6
2,138,652	-				+0.4
2,138,652	-				+0.1
2,138,652	-				+0.1
2,138,663	+				-0.1
2,138,691	-				+0.1
2,138,724	+				-0.3
2,138,740	+				-0.1
2,138,741	-				+0.4
2,138,748	-				-0.2
2,138,748	-				-0.7
2,138,748	-				+0.9
2,138,753	+				+1.0
2,138,761	-				+0.6
2,138,768	-				-0.4
2,138,770	+				-0.3
2,138,788	-				-1.1
2,138,794	-				+0.8
2,138,794	-				-0.2
2,138,794	-				-0.3
2,138,822	+				-1.1
2,138,824	+				+0.2
2,138,832	-				-0.1
2,138,832	-				+0.1
2,138,838	-				-0.4
2,138,842	-				+0.1
2,138,864	-				-0.4
2,138,878	-				-0.6
2,138,887	-				+0.2
2,138,896	+				+2.5
2,138,896	+				+0.4
2,138,898	-				+0.1
2,138,899	-				+0.1
2,138,899	-				-0.3
2,138,901	+				+1.5
2,138,904	-				+0.1
2,138,935	+				+0.9
2,138,938	-				+0.7
2,138,940	+				+0.5
2,138,943	-				-0.4
2,138,943	-				-0.5
2,138,948	-				-0.4
2,138,948	-				+0.6
2,138,954	+				+0.3
2,138,954	+				-0.0
2,138,960	-				+0.2
2,138,974	+				+0.7
2,138,974	+				-0.3
2,138,974	+				-1.1
2,138,974	+				-0.7
2,138,974	+				+0.7
2,138,974	+				+1.5
2,138,982	-				-1.1
2,138,982	-				-0.5
2,138,982	-				-0.9
2,138,982	-				-0.7
2,138,982	-				-1.8
2,138,998	-				-0.7
2,139,104	-				-0.1
2,139,117	+				+0.9
2,139,122	+				-1.5
2,139,122	+				+1.7
2,139,122	+				-0.8
2,139,130	-				-0.0
2,139,130	-				+0.1
2,139,138	-				-0.5
2,139,148	+				+1.0
2,139,148	+				-1.3
2,139,156	+				-0.3
2,139,156	+				+1.0
2,139,156	+				+1.3
2,139,156	-				+1.0
2,139,156	-				-0.4
2,139,156	-				+0.0
2,139,156	-				+0.1
2,139,156	-				+0.2
2,139,156	-				-0.6
2,139,164	-				-1.6
2,139,211	+		Dsui_2023	0.11	+0.5
2,139,219	-		Dsui_2023	0.12	-0.1
2,139,230	-		Dsui_2023	0.13	-0.3
2,139,253	-		Dsui_2023	0.15	-0.3
2,139,404	+		Dsui_2023	0.30	-0.3
2,139,405	-		Dsui_2023	0.30	-0.4
2,139,429	+		Dsui_2023	0.33	+0.5
2,139,481	-		Dsui_2023	0.38	-0.8
2,139,541	-		Dsui_2023	0.44	-0.2
2,139,543	+		Dsui_2023	0.44	-0.5
2,139,561	-		Dsui_2023	0.46	-0.2
2,139,622	+		Dsui_2023	0.52	-0.3
2,139,630	-		Dsui_2023	0.52	-0.5
2,139,652	+		Dsui_2023	0.55	+0.0
2,139,740	-		Dsui_2023	0.63	+0.1
2,139,756	-		Dsui_2023	0.65	-1.8
2,139,786	-		Dsui_2023	0.68	-0.4
2,139,790	+		Dsui_2023	0.68	-0.2
2,139,806	+		Dsui_2023	0.70	+0.9
2,139,876	-		Dsui_2023	0.77	+0.1
2,139,946	+				+1.5
2,139,962	-		Dsui_2023	0.85	+0.0
2,139,985	-		Dsui_2023	0.88	-0.2
2,140,027	+				+0.5
2,140,027	+				+2.5
2,140,035	-				-0.1
2,140,035	-				-0.7
2,140,085	-				-0.0
2,140,092	+				+0.9
2,140,103	+				+0.9
2,140,186	-				-0.5
2,140,238	-				+0.5
2,140,239	-				+0.9
2,140,314	+				+0.3
2,140,383	+		Dsui_2024	0.18	-0.5
2,140,410	-		Dsui_2024	0.21	-1.2
2,140,437	-		Dsui_2024	0.24	+0.3
2,140,470	-		Dsui_2024	0.28	-0.8
2,140,623	+		Dsui_2024	0.47	-0.5
2,140,670	+				+1.5
2,140,681	+		Dsui_2024	0.54	-0.7
2,140,911	-		Dsui_2024	0.82	-0.3
2,140,918	+		Dsui_2024	0.83	-1.4
2,140,954	+		Dsui_2024	0.87	+0.5
2,141,002	-				-0.7
2,141,090	+				+0.5
2,141,093	-				+1.5