Experiment: R2A with sodium pyruvate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0668 and Dsui_0669 overlap by 8 nucleotides Dsui_0669 and Dsui_0671 are separated by 779 nucleotides
Dsui_0668: Dsui_0668 - putative membrane protein, at 665,635 to 668,355
_0668
Dsui_0669: Dsui_0669 - hypothetical protein, at 668,348 to 668,509
_0669
Dsui_0671: Dsui_0671 - arginase family hydrolase, arginase/agmainase/formiminoglutamate hydrolase, at 669,289 to 670,167
_0671
Position (kb) 668
669 Strain fitness (log2 ratio) -2
-1
0
1
2 at 667.349 kb on - strand, within Dsui_0668 at 667.351 kb on + strand, within Dsui_0668 at 667.381 kb on - strand, within Dsui_0668 at 667.480 kb on + strand, within Dsui_0668 at 667.480 kb on + strand, within Dsui_0668 at 667.499 kb on - strand, within Dsui_0668 at 667.499 kb on - strand, within Dsui_0668 at 667.513 kb on + strand at 667.513 kb on + strand, within Dsui_0668 at 667.582 kb on + strand, within Dsui_0668 at 667.692 kb on + strand, within Dsui_0668 at 667.722 kb on + strand, within Dsui_0668 at 667.760 kb on + strand, within Dsui_0668 at 667.798 kb on + strand, within Dsui_0668 at 667.829 kb on + strand, within Dsui_0668 at 667.847 kb on + strand, within Dsui_0668 at 667.855 kb on - strand, within Dsui_0668 at 667.861 kb on - strand, within Dsui_0668 at 667.920 kb on - strand, within Dsui_0668 at 668.067 kb on + strand, within Dsui_0668 at 668.075 kb on - strand, within Dsui_0668 at 668.086 kb on - strand at 668.181 kb on + strand at 668.181 kb on + strand at 668.210 kb on - strand at 668.326 kb on - strand at 668.338 kb on - strand at 668.372 kb on - strand, within Dsui_0669 at 668.387 kb on + strand, within Dsui_0669 at 668.402 kb on + strand, within Dsui_0669 at 668.412 kb on + strand, within Dsui_0669 at 668.431 kb on - strand, within Dsui_0669 at 668.499 kb on + strand at 668.606 kb on + strand at 668.660 kb on - strand at 668.660 kb on - strand at 668.702 kb on - strand at 668.705 kb on + strand at 668.705 kb on + strand at 668.713 kb on - strand at 668.713 kb on - strand at 668.941 kb on + strand at 668.968 kb on - strand at 669.067 kb on + strand at 669.149 kb on + strand at 669.155 kb on - strand at 669.168 kb on + strand at 669.417 kb on - strand, within Dsui_0671 at 669.446 kb on + strand, within Dsui_0671 at 669.483 kb on - strand, within Dsui_0671
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with sodium pyruvate remove 667,349 - Dsui_0668 0.63 +0.6 667,351 + Dsui_0668 0.63 -1.2 667,381 - Dsui_0668 0.64 -0.0 667,480 + Dsui_0668 0.68 +0.1 667,480 + Dsui_0668 0.68 -0.1 667,499 - Dsui_0668 0.69 +0.1 667,499 - Dsui_0668 0.69 +0.9 667,513 + +2.0 667,513 + Dsui_0668 0.69 -0.2 667,582 + Dsui_0668 0.72 +0.1 667,692 + Dsui_0668 0.76 -0.4 667,722 + Dsui_0668 0.77 -0.1 667,760 + Dsui_0668 0.78 +0.6 667,798 + Dsui_0668 0.79 -0.9 667,829 + Dsui_0668 0.81 +0.2 667,847 + Dsui_0668 0.81 +1.8 667,855 - Dsui_0668 0.82 -0.0 667,861 - Dsui_0668 0.82 -0.0 667,920 - Dsui_0668 0.84 +0.9 668,067 + Dsui_0668 0.89 -0.4 668,075 - Dsui_0668 0.90 +0.1 668,086 - +0.3 668,181 + -0.3 668,181 + +0.1 668,210 - -0.1 668,326 - +0.1 668,338 - +0.0 668,372 - Dsui_0669 0.15 +0.6 668,387 + Dsui_0669 0.24 +0.7 668,402 + Dsui_0669 0.33 -1.6 668,412 + Dsui_0669 0.40 -1.4 668,431 - Dsui_0669 0.51 -0.7 668,499 + +0.6 668,606 + +0.6 668,660 - -0.1 668,660 - -0.1 668,702 - +0.9 668,705 + +0.5 668,705 + +0.4 668,713 - +0.0 668,713 - +0.4 668,941 + -0.2 668,968 - +0.3 669,067 + +1.6 669,149 + +1.0 669,155 - -0.4 669,168 + -0.8 669,417 - Dsui_0671 0.15 -2.2 669,446 + Dsui_0671 0.18 +0.1 669,483 - Dsui_0671 0.22 +0.1
Or see this region's nucleotide sequence