Strain Fitness in Shewanella amazonensis SB2B around Sama_2109

Experiment: D-Mannose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Mannose
2,551,338	+				-0.9
2,551,342	+				-1.1
2,551,343	-				+0.0
2,551,466	-				+0.3
2,551,513	+				-0.1
2,551,514	-				-1.0
2,551,544	-				-0.1
2,551,578	+				+1.7
2,551,578	+				-0.9
2,551,579	-				+0.5
2,551,579	-				-0.1
2,551,579	-				+1.2
2,551,617	+				-0.3
2,551,618	-				+0.4
2,551,619	+				-0.7
2,551,619	+				-0.2
2,551,619	+				+0.3
2,551,620	-				+1.3
2,551,620	-				-0.6
2,551,620	-				+1.1
2,551,620	-				+2.0
2,551,620	-				+0.1
2,551,620	-				+0.2
2,551,643	-		Sama_2108	0.12	-2.9
2,551,673	-		Sama_2108	0.16	+0.9
2,551,673	-		Sama_2108	0.16	-1.0
2,551,673	-		Sama_2108	0.16	+0.7
2,551,692	+		Sama_2108	0.19	+0.3
2,551,724	-		Sama_2108	0.23	-0.4
2,551,826	-		Sama_2108	0.38	+2.1
2,551,836	+		Sama_2108	0.40	-2.1
2,551,836	+		Sama_2108	0.40	-0.4
2,551,836	+		Sama_2108	0.40	-0.4
2,551,850	-		Sama_2108	0.42	-0.1
2,551,869	+		Sama_2108	0.44	+0.5
2,551,869	+		Sama_2108	0.44	-0.3
2,551,869	+		Sama_2108	0.44	+0.1
2,551,870	-		Sama_2108	0.45	+1.2
2,551,870	-		Sama_2108	0.45	+0.3
2,551,870	-		Sama_2108	0.45	+0.7
2,551,870	-		Sama_2108	0.45	-0.3
2,551,870	-		Sama_2108	0.45	-0.1
2,551,883	+		Sama_2108	0.47	-0.9
2,551,899	+		Sama_2108	0.49	-1.4
2,551,900	-		Sama_2108	0.49	+0.4
2,551,942	-		Sama_2108	0.55	+1.7
2,551,968	-		Sama_2108	0.59	+0.1
2,552,006	-		Sama_2108	0.64	-0.7
2,552,034	-		Sama_2108	0.68	+0.8
2,552,034	-		Sama_2108	0.68	-0.3
2,552,034	-		Sama_2108	0.68	+0.5
2,552,087	+		Sama_2108	0.76	-0.4
2,552,152	+		Sama_2108	0.86	+0.3
2,552,152	+		Sama_2108	0.86	-1.7
2,552,153	-		Sama_2108	0.86	-0.8
2,552,177	+		Sama_2108	0.89	+0.2
2,552,177	+		Sama_2108	0.89	+0.1
2,552,177	+		Sama_2108	0.89	+1.5
2,552,178	-		Sama_2108	0.89	-0.7
2,552,178	-		Sama_2108	0.89	+1.1
2,552,178	-		Sama_2108	0.89	-0.3
2,552,178	-		Sama_2108	0.89	-0.3
2,552,178	-		Sama_2108	0.89	-0.6
2,552,178	-		Sama_2108	0.89	-0.7
2,552,180	+		Sama_2108	0.90	+0.1
2,552,222	-				-1.6
2,552,277	+				-0.3
2,552,277	+				+0.4
2,552,277	+				+0.5
2,552,278	-				-0.3
2,552,278	-				-2.1
2,552,283	+				+1.2
2,552,324	-				+0.4
2,552,355	+		Sama_2109	0.14	-0.8
2,552,356	-		Sama_2109	0.14	+0.5
2,552,423	+		Sama_2109	0.28	+0.5
2,552,423	+		Sama_2109	0.28	+0.5
2,552,424	-		Sama_2109	0.28	+1.7
2,552,424	-		Sama_2109	0.28	+1.5
2,552,424	-		Sama_2109	0.28	-0.1
2,552,485	+		Sama_2109	0.41	-2.6
2,552,486	-		Sama_2109	0.41	+2.9
2,552,486	-		Sama_2109	0.41	+0.9
2,552,486	-		Sama_2109	0.41	-0.3
2,552,489	+		Sama_2109	0.42	+0.5
2,552,489	+		Sama_2109	0.42	+0.2
2,552,489	+		Sama_2109	0.42	+0.5
2,552,490	-		Sama_2109	0.42	+1.6
2,552,490	-		Sama_2109	0.42	-0.3
2,552,490	-		Sama_2109	0.42	+0.7
2,552,515	-		Sama_2109	0.47	+0.1
2,552,523	+		Sama_2109	0.49	+0.4
2,552,523	+		Sama_2109	0.49	+2.0
2,552,523	+		Sama_2109	0.49	-0.7
2,552,587	-		Sama_2109	0.62	+1.3
2,552,665	-		Sama_2109	0.79	+0.7
2,552,665	-		Sama_2109	0.79	+0.2
2,552,765	+				-0.1
2,552,765	+				+0.9
2,552,765	+				+0.4
2,552,776	-				+0.3
2,552,807	+				-0.9
2,552,807	+				+0.3
2,552,808	-				-1.1
2,552,836	+				-1.4
2,552,836	+				+1.0
2,552,936	+		Sama_2110	0.45	-0.5
2,552,936	+		Sama_2110	0.45	-0.9
2,552,936	+		Sama_2110	0.45	+2.3
2,552,936	+		Sama_2110	0.45	+1.2
2,552,936	+		Sama_2110	0.45	-0.1
2,552,936	+		Sama_2110	0.45	+0.9
2,552,936	+		Sama_2110	0.45	-1.4
2,552,936	+		Sama_2110	0.45	-0.6
2,552,936	+		Sama_2110	0.45	-0.1
2,552,936	+		Sama_2110	0.45	-2.4
2,552,936	+		Sama_2110	0.45	-0.5
2,552,937	-		Sama_2110	0.46	+0.0
2,552,937	-		Sama_2110	0.46	+1.1
2,552,937	-		Sama_2110	0.46	+0.7
2,552,937	-		Sama_2110	0.46	-0.0
2,552,998	+		Sama_2110	0.74	+0.3
2,552,999	-		Sama_2110	0.74	+0.3
2,553,004	+		Sama_2110	0.76	+0.4
2,553,004	+		Sama_2110	0.76	+0.7
2,553,005	-		Sama_2110	0.77	+0.3
2,553,084	+				-0.3
2,553,085	-				+0.4
2,553,085	-				-1.3
2,553,091	+				+1.7
2,553,106	+				+1.1
2,553,106	+				+0.3
2,553,106	+				+1.5
2,553,107	-				-0.7
2,553,123	+				+0.1
2,553,161	+				-0.9
2,553,161	+				-0.0
2,553,161	+				+0.5
2,553,178	+				+0.4
2,553,265	-				+0.1
2,553,372	-		Sama_2111	0.13	-0.0
2,553,412	+		Sama_2111	0.15	+0.3
2,553,412	+		Sama_2111	0.15	+1.1
2,553,412	+		Sama_2111	0.15	+0.7
2,553,413	-		Sama_2111	0.15	+0.2
2,553,413	-		Sama_2111	0.15	+1.0
2,553,469	+		Sama_2111	0.19	-0.3
2,553,469	+		Sama_2111	0.19	-2.3
2,553,469	+		Sama_2111	0.19	+0.4
2,553,470	-		Sama_2111	0.19	+1.1
2,553,470	-		Sama_2111	0.19	-0.4
2,553,472	-		Sama_2111	0.19	-1.7
2,553,482	-		Sama_2111	0.20	+0.9
2,553,492	+		Sama_2111	0.21	+0.1
2,553,492	+		Sama_2111	0.21	+0.1
2,553,492	+		Sama_2111	0.21	-1.3
2,553,537	-		Sama_2111	0.24	+2.3
2,553,537	-		Sama_2111	0.24	-0.9
2,553,550	+		Sama_2111	0.24	+0.2
2,553,550	+		Sama_2111	0.24	-1.1
2,553,551	-		Sama_2111	0.24	-3.0
2,553,551	-		Sama_2111	0.24	+0.5
2,553,551	-		Sama_2111	0.24	-0.4
2,553,560	+		Sama_2111	0.25	-1.5
2,553,629	-		Sama_2111	0.30	-0.8
2,553,688	-		Sama_2111	0.33	+0.0
2,553,733	+		Sama_2111	0.36	+0.3
2,553,733	+		Sama_2111	0.36	-0.3
2,553,733	+		Sama_2111	0.36	+0.2
2,553,734	-		Sama_2111	0.36	-1.6
2,553,734	-		Sama_2111	0.36	+0.4
2,553,740	+		Sama_2111	0.37	+0.5
2,553,740	+		Sama_2111	0.37	+0.2
2,553,740	+		Sama_2111	0.37	+0.4