Strain Fitness in Shewanella oneidensis MR-1 around SO4689

Experiment: Bacitracin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.5 mg/ml
4,887,203	+				+3.6
4,887,217	+				+3.8
4,887,246	+				+3.8
4,887,261	+				+3.3
4,887,469	-				+2.8
4,887,541	+				+2.7
4,887,541	+				+2.8
4,887,544	-		SO4688	0.10	+2.7
4,887,544	-		SO4688	0.10	+2.2
4,887,549	-		SO4688	0.11	+1.7
4,887,551	+		SO4688	0.11	+2.4
4,887,551	+		SO4688	0.11	+2.7
4,887,559	-		SO4688	0.12	+2.3
4,887,602	-		SO4688	0.18	+3.0
4,887,623	+		SO4688	0.21	+2.4
4,887,664	-		SO4688	0.27	+3.2
4,887,666	+		SO4688	0.27	+2.3
4,887,671	+		SO4688	0.28	+2.7
4,887,671	+		SO4688	0.28	+3.1
4,887,671	+		SO4688	0.28	+3.2
4,887,671	+		SO4688	0.28	+2.0
4,887,674	-		SO4688	0.28	+2.6
4,887,674	-		SO4688	0.28	+3.0
4,887,676	+		SO4688	0.28	+3.3
4,887,676	+		SO4688	0.28	+2.5
4,887,676	+		SO4688	0.28	+1.4
4,887,676	+		SO4688	0.28	+1.8
4,887,679	-		SO4688	0.29	+2.7
4,887,679	-		SO4688	0.29	+2.3
4,887,679	-		SO4688	0.29	+3.1
4,887,679	-		SO4688	0.29	+2.7
4,887,684	-		SO4688	0.29	+2.9
4,887,684	-		SO4688	0.29	+2.2
4,887,684	-		SO4688	0.29	+3.6
4,887,684	-		SO4688	0.29	+2.8
4,887,701	-		SO4688	0.32	+3.4
4,887,701	-		SO4688	0.32	+3.7
4,887,748	+		SO4688	0.38	+3.0
4,887,801	-		SO4688	0.45	+2.6
4,887,903	+		SO4688	0.59	+2.7
4,887,909	-		SO4688	0.60	+2.7
4,887,935	+		SO4688	0.64	+2.7
4,887,935	+		SO4688	0.64	+3.4
4,887,952	+		SO4688	0.66	+2.1
4,887,961	+		SO4688	0.67	+0.9
4,888,075	-		SO4688	0.83	+2.9
4,888,138	-				+2.7
4,888,139	+				+3.3
4,888,196	+				+0.9
4,888,213	+				+2.1
4,888,247	+				+2.4
4,888,284	-		SO4689	0.12	+2.9
4,888,416	+		SO4689	0.32	+0.0
4,888,417	-		SO4689	0.33	+2.6
4,888,432	+		SO4689	0.35	+2.5
4,888,432	+		SO4689	0.35	+2.4
4,888,486	+		SO4689	0.43	+1.6
4,888,494	-		SO4689	0.44	+2.0
4,888,494	-		SO4689	0.44	+2.5
4,888,513	+		SO4689	0.47	+2.9
4,888,701	-		SO4689	0.76	+1.1
4,888,773	+		SO4689	0.87	+1.4
4,888,821	+				+1.5
4,888,829	-				+2.8
4,888,829	-				+2.2
4,888,829	-				+2.3
4,888,829	-				+1.0
4,888,829	-				+1.3
4,888,829	-				+1.8
4,888,829	-				+2.0
4,888,829	-				+2.8
4,889,102	+				+2.3
4,889,175	-				+2.3
4,889,211	+				+2.9
4,889,219	-				-0.0
4,889,375	-		SO4690	0.16	+1.1
4,889,398	+		SO4690	0.17	+2.1
4,889,439	+		SO4690	0.19	+1.8
4,889,447	-		SO4690	0.20	+3.0
4,889,462	+		SO4690	0.21	+1.8
4,889,488	+		SO4690	0.22	+2.0
4,889,538	-		SO4690	0.25	+2.7
4,889,640	+		SO4690	0.31	+2.2
4,889,648	-		SO4690	0.31	+1.8
4,889,648	-		SO4690	0.31	+2.8
4,889,661	+		SO4690	0.32	+1.8
4,889,663	-		SO4690	0.32	+2.3
4,889,759	+		SO4690	0.38	+2.6
4,889,819	+		SO4690	0.41	+2.8
4,889,827	-		SO4690	0.42	+2.3
4,889,827	-		SO4690	0.42	+2.1
4,889,827	-		SO4690	0.42	+2.4
4,889,827	-		SO4690	0.42	+2.3
4,889,833	-		SO4690	0.42	+3.1
4,889,835	+		SO4690	0.42	+2.2