Strain Fitness in Shewanella oneidensis MR-1 around SO4608

Experiment: Bacitracin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.5 mg/ml
4,803,053	-		SO4607	0.49	-2.2
4,803,118	+		SO4607	0.53	+0.8
4,803,118	+		SO4607	0.53	-0.5
4,803,166	+		SO4607	0.56	+0.5
4,803,171	+		SO4607	0.56	-0.3
4,803,174	-		SO4607	0.57	-0.7
4,803,206	-		SO4607	0.59	+0.1
4,803,240	+		SO4607	0.61	-0.4
4,803,250	+		SO4607	0.61	-0.1
4,803,264	+		SO4607	0.62	-0.1
4,803,288	-		SO4607	0.64	+0.1
4,803,337	-		SO4607	0.67	-0.6
4,803,361	-		SO4607	0.68	-0.8
4,803,406	-		SO4607	0.71	-0.3
4,803,423	+		SO4607	0.72	+0.2
4,803,527	+		SO4607	0.79	-0.5
4,803,527	+		SO4607	0.79	+0.3
4,803,545	+		SO4607	0.80	+0.1
4,803,553	-		SO4607	0.80	-0.3
4,803,640	+		SO4607	0.86	+0.7
4,803,796	+				+0.6
4,803,796	+				-1.5
4,803,796	+				+1.1
4,803,796	+				-0.4
4,803,797	+				-0.3
4,803,804	-				-1.1
4,803,804	-				-0.7
4,803,805	-				+0.3
4,803,826	-				+0.3
4,803,880	-				+0.4
4,803,926	+	coxG	SO4608	0.10	+0.0
4,803,926	+	coxG	SO4608	0.10	-0.3
4,803,936	+	coxG	SO4608	0.12	+0.2
4,803,938	+	coxG	SO4608	0.12	-0.2
4,803,973	+	coxG	SO4608	0.18	+0.5
4,803,978	+	coxG	SO4608	0.19	+0.4
4,803,986	-	coxG	SO4608	0.21	+1.3
4,803,986	-	coxG	SO4608	0.21	+0.4
4,804,082	-	coxG	SO4608	0.37	+0.7
4,804,157	+	coxG	SO4608	0.50	+0.9
4,804,294	-	coxG	SO4608	0.74	-0.4
4,804,294	-	coxG	SO4608	0.74	+0.3
4,804,300	-	coxG	SO4608	0.75	-0.5
4,804,302	-	coxG	SO4608	0.75	-0.9
4,804,319	-	coxG	SO4608	0.78	+0.1
4,804,349	-	coxG	SO4608	0.83	+0.3
4,804,361	+	coxG	SO4608	0.85	+0.7
4,804,361	+	coxG	SO4608	0.85	+0.1
4,804,368	+	coxG	SO4608	0.86	-0.0
4,804,368	+	coxG	SO4608	0.86	-1.1
4,804,376	-	coxG	SO4608	0.88	-0.0
4,804,376	-	coxG	SO4608	0.88	-0.0
4,804,376	-	coxG	SO4608	0.88	+0.9
4,804,376	-	coxG	SO4608	0.88	-0.0
4,804,378	+	coxG	SO4608	0.88	+0.4
4,804,380	+	coxG	SO4608	0.88	+0.3
4,804,380	+	coxG	SO4608	0.88	+0.1
4,804,386	-	coxG	SO4608	0.89	+0.4
4,804,386	-	coxG	SO4608	0.89	+0.5
4,804,394	-				+0.1
4,804,417	-				+0.5
4,804,430	-				+0.4
4,804,480	-				-1.3
4,804,490	-				+0.4
4,804,540	-		SO4609	0.11	-0.0
4,804,560	-		SO4609	0.13	-0.1
4,804,569	+		SO4609	0.14	+0.1
4,804,569	+		SO4609	0.14	+0.3
4,804,702	+		SO4609	0.29	-0.7
4,804,702	+		SO4609	0.29	-0.2
4,804,710	-		SO4609	0.30	+0.8
4,804,710	-		SO4609	0.30	-0.6
4,804,861	+		SO4609	0.48	+0.1
4,804,869	-		SO4609	0.49	+0.0
4,804,895	-		SO4609	0.51	-1.4
4,804,928	+		SO4609	0.55	-0.3
4,804,936	-		SO4609	0.56	+0.5
4,804,936	-		SO4609	0.56	+1.5
4,804,943	+		SO4609	0.57	+0.1
4,805,020	-		SO4609	0.66	+0.8
4,805,036	+		SO4609	0.68	-0.2
4,805,044	-		SO4609	0.68	-0.1
4,805,050	+		SO4609	0.69	+0.3
4,805,058	-		SO4609	0.70	-1.6
4,805,144	-		SO4609	0.80	+0.3
4,805,159	+		SO4609	0.82	+1.7
4,805,217	+		SO4609	0.88	-0.5
4,805,217	+		SO4609	0.88	-1.4
4,805,217	+		SO4609	0.88	+0.7
4,805,225	-		SO4609	0.89	+0.2
4,805,281	+				-0.4
4,805,363	+				+0.2
4,805,371	-				+0.7
4,805,387	+				-0.1
4,805,395	-		SO4610	0.13	+0.2
4,805,397	+		SO4610	0.13	-1.5
4,805,399	+		SO4610	0.14	+1.0
4,805,399	+		SO4610	0.14	-0.5
4,805,407	-		SO4610	0.18	+0.7