Strain Fitness in Shewanella oneidensis MR-1 around SO4130

Experiment: Bacitracin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.5 mg/ml
4,287,048	+				+0.4
4,287,056	-				+0.4
4,287,080	-				+0.5
4,287,267	+		SO4129	0.24	+0.7
4,287,275	-		SO4129	0.25	+0.4
4,287,275	-		SO4129	0.25	-0.2
4,287,293	+		SO4129	0.27	-0.5
4,287,301	-		SO4129	0.28	-0.1
4,287,301	-		SO4129	0.28	+0.6
4,287,305	+		SO4129	0.29	-1.6
4,287,410	+		SO4129	0.40	-1.8
4,287,418	-		SO4129	0.41	+0.2
4,287,418	-		SO4129	0.41	+0.7
4,287,540	-		SO4129	0.54	+0.9
4,287,594	-		SO4129	0.59	+1.5
4,287,723	-		SO4129	0.73	+0.3
4,287,737	-		SO4129	0.75	+0.6
4,287,784	-		SO4129	0.80	+0.6
4,287,929	-				-0.4
4,288,034	-				+0.7
4,288,049	+		SO4130	0.12	-0.0
4,288,049	+		SO4130	0.12	+0.2
4,288,052	-		SO4130	0.13	-0.5
4,288,064	-		SO4130	0.16	-1.3
4,288,114	+		SO4130	0.26	-0.3
4,288,153	-		SO4130	0.35	+0.3
4,288,207	-		SO4130	0.46	+1.4
4,288,245	+		SO4130	0.55	-0.9
4,288,287	+		SO4130	0.64	-0.7
4,288,295	-		SO4130	0.65	-0.8
4,288,302	-		SO4130	0.67	+0.6
4,288,318	+		SO4130	0.70	+0.6
4,288,341	+		SO4130	0.75	+0.4
4,288,341	+		SO4130	0.75	+0.3
4,288,349	-		SO4130	0.77	+0.9
4,288,349	-		SO4130	0.77	+0.6
4,288,349	-		SO4130	0.77	+0.7
4,288,349	-		SO4130	0.77	+0.2
4,288,376	-		SO4130	0.83	+0.5
4,288,448	-				+0.4
4,288,493	-				-0.2
4,288,496	-				-0.4
4,288,876	-				-0.6
4,288,894	-				-0.9
4,288,897	+				-1.1
4,288,953	+				-0.4
4,288,980	+				-0.8
4,289,011	+				-0.0
4,289,166	+		SO4131	0.30	-0.0
4,289,166	+		SO4131	0.30	-0.7
4,289,179	-		SO4131	0.32	-0.0
4,289,211	-		SO4131	0.36	-1.0
4,289,283	-		SO4131	0.45	-0.5
4,289,286	+		SO4131	0.46	+0.9
4,289,298	+		SO4131	0.47	+1.1
4,289,298	+		SO4131	0.47	+1.1
4,289,304	+		SO4131	0.48	+0.5
4,289,330	-		SO4131	0.52	+0.5
4,289,330	-		SO4131	0.52	+0.7