Strain Fitness in Shewanella oneidensis MR-1 around SO3273

Experiment: Bacitracin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.5 mg/ml
3,411,946	+				-1.0
3,411,986	+				-0.8
3,411,992	+				+0.1
3,412,099	+				-1.2
3,412,112	-				+1.7
3,412,165	-				+2.0
3,412,211	+				+1.8
3,412,211	+				+2.4
3,412,211	+				+2.0
3,412,219	-				+2.3
3,412,219	-				+1.8
3,412,219	-				-0.5
3,412,219	-				+1.6
3,412,219	-				+1.4
3,412,284	-				+1.6
3,412,384	+		SO3273	0.10	+1.1
3,412,392	-		SO3273	0.11	+2.5
3,412,392	-		SO3273	0.11	+1.5
3,412,525	+		SO3273	0.16	+0.8
3,412,534	-		SO3273	0.16	+1.2
3,412,547	+		SO3273	0.17	+0.6
3,412,553	-		SO3273	0.17	+2.2
3,412,555	-		SO3273	0.17	+1.8
3,412,726	+		SO3273	0.24	+1.2
3,412,905	+		SO3273	0.31	+1.1
3,412,924	+		SO3273	0.32	+1.5
3,412,979	+		SO3273	0.34	+1.4
3,413,001	+		SO3273	0.35	+2.2
3,413,051	+		SO3273	0.37	+2.4
3,413,051	+		SO3273	0.37	+1.6
3,413,051	+		SO3273	0.37	+1.5
3,413,053	-		SO3273	0.37	+1.6
3,413,053	-		SO3273	0.37	+1.7
3,413,059	+		SO3273	0.38	+2.2
3,413,059	+		SO3273	0.38	+2.2
3,413,059	+		SO3273	0.38	+0.8
3,413,059	-		SO3273	0.38	+2.5
3,413,059	-		SO3273	0.38	+1.9
3,413,067	-		SO3273	0.38	+2.0
3,413,069	+		SO3273	0.38	+0.8
3,413,069	+		SO3273	0.38	+2.1
3,413,069	+		SO3273	0.38	+1.9
3,413,075	-		SO3273	0.38	+1.3
3,413,094	-		SO3273	0.39	+1.5
3,413,107	-		SO3273	0.40	+0.9
3,413,146	+		SO3273	0.41	+1.4
3,413,170	+		SO3273	0.42	+1.6
3,413,170	+		SO3273	0.42	+1.4
3,413,170	+		SO3273	0.42	+1.4
3,413,178	-		SO3273	0.42	+1.0
3,413,180	+		SO3273	0.43	+0.7
3,413,191	+		SO3273	0.43	+1.5
3,413,191	+		SO3273	0.43	+1.7
3,413,199	-		SO3273	0.43	+0.9
3,413,199	-		SO3273	0.43	+1.5
3,413,223	-		SO3273	0.44	+2.1
3,413,228	-		SO3273	0.45	+1.5
3,413,246	+		SO3273	0.45	+1.8
3,413,247	-		SO3273	0.45	+1.9
3,413,247	-		SO3273	0.45	+1.4
3,413,269	+		SO3273	0.46	+1.7
3,413,284	-		SO3273	0.47	+0.6
3,413,289	+		SO3273	0.47	+1.7
3,413,289	+		SO3273	0.47	+1.3
3,413,295	+		SO3273	0.47	+2.0
3,413,297	-		SO3273	0.47	+2.1
3,413,297	-		SO3273	0.47	+2.3
3,413,297	-		SO3273	0.47	+1.7
3,413,303	-		SO3273	0.48	+2.1
3,413,303	-		SO3273	0.48	+0.8
3,413,303	-		SO3273	0.48	+1.6
3,413,303	-		SO3273	0.48	+1.6
3,413,431	+		SO3273	0.53	-0.1
3,413,431	+		SO3273	0.53	+2.8
3,413,435	-		SO3273	0.53	+1.7
3,413,439	-		SO3273	0.53	+2.3
3,413,449	+		SO3273	0.53	+1.7
3,413,457	-		SO3273	0.54	+1.7
3,413,457	-		SO3273	0.54	+1.8
3,413,464	+		SO3273	0.54	+2.4
3,413,467	+		SO3273	0.54	+2.0
3,413,477	-		SO3273	0.55	+1.8
3,413,483	-		SO3273	0.55	+1.2
3,413,501	+		SO3273	0.56	+1.7
3,413,501	+		SO3273	0.56	+2.6
3,413,501	+		SO3273	0.56	+1.5
3,413,501	+		SO3273	0.56	+2.0
3,413,501	+		SO3273	0.56	+1.5
3,413,501	+		SO3273	0.56	+3.3
3,413,501	+		SO3273	0.56	+1.8
3,413,501	+		SO3273	0.56	+2.2
3,413,509	-		SO3273	0.56	+0.8
3,413,509	-		SO3273	0.56	+1.7
3,413,509	-		SO3273	0.56	+1.9
3,413,509	-		SO3273	0.56	+1.9
3,413,509	-		SO3273	0.56	+1.8
3,413,509	-		SO3273	0.56	+1.5
3,413,509	-		SO3273	0.56	+1.4
3,413,509	-		SO3273	0.56	+1.3
3,413,532	-		SO3273	0.57	+1.5
3,413,547	+		SO3273	0.57	+1.8
3,413,555	-		SO3273	0.58	+1.6
3,413,564	+		SO3273	0.58	+1.6
3,413,570	+		SO3273	0.58	+1.4
3,413,580	+		SO3273	0.59	+2.0
3,413,580	+		SO3273	0.59	+0.4
3,413,621	+		SO3273	0.60	+2.6
3,413,627	+		SO3273	0.61	+2.2
3,413,634	-		SO3273	0.61	+2.1
3,413,634	-		SO3273	0.61	+1.7
3,413,634	-		SO3273	0.61	+2.0
3,413,656	-		SO3273	0.62	+1.5
3,413,679	-		SO3273	0.63	+0.4
3,413,811	-		SO3273	0.68	+1.3
3,413,837	+		SO3273	0.69	+2.5
3,413,837	+		SO3273	0.69	+1.8
3,413,843	+		SO3273	0.69	+1.0
3,413,845	-		SO3273	0.70	+1.9
3,413,893	-		SO3273	0.71	+0.9
3,413,925	+		SO3273	0.73	+2.1
3,413,938	-		SO3273	0.73	+1.4
3,413,948	-		SO3273	0.74	+1.5
3,413,978	+		SO3273	0.75	+1.7
3,413,986	-		SO3273	0.75	+1.1
3,413,986	-		SO3273	0.75	+2.1
3,413,988	+		SO3273	0.75	+1.6
3,413,988	+		SO3273	0.75	+1.4
3,413,993	+		SO3273	0.75	+2.2
3,413,996	-		SO3273	0.76	+1.6
3,413,998	+		SO3273	0.76	+2.0
3,414,002	+		SO3273	0.76	+1.8
3,414,006	-		SO3273	0.76	+1.1
3,414,010	-		SO3273	0.76	+2.4
3,414,010	-		SO3273	0.76	+1.9
3,414,060	+		SO3273	0.78	+1.9
3,414,087	-		SO3273	0.79	+1.5
3,414,090	+		SO3273	0.79	+1.4
3,414,090	+		SO3273	0.79	+1.7
3,414,090	+		SO3273	0.79	+2.0
3,414,098	-		SO3273	0.80	-0.5
3,414,150	+		SO3273	0.82	+1.9
3,414,154	-		SO3273	0.82	+1.8
3,414,156	-		SO3273	0.82	+2.0
3,414,156	-		SO3273	0.82	+1.9
3,414,156	-		SO3273	0.82	+2.0
3,414,156	-		SO3273	0.82	+1.5
3,414,169	+		SO3273	0.83	+1.5
3,414,179	+		SO3273	0.83	+1.1
3,414,179	+		SO3273	0.83	+1.4
3,414,179	+		SO3273	0.83	+0.5
3,414,179	+		SO3273	0.83	+1.5
3,414,179	+		SO3273	0.83	+1.7
3,414,179	+		SO3273	0.83	+1.9
3,414,179	+		SO3273	0.83	+1.9
3,414,179	+		SO3273	0.83	+2.2
3,414,179	+		SO3273	0.83	+2.3
3,414,179	+		SO3273	0.83	+2.1
3,414,179	+		SO3273	0.83	+0.6
3,414,184	+		SO3273	0.83	+1.8
3,414,187	-		SO3273	0.83	+2.2
3,414,187	-		SO3273	0.83	+1.4
3,414,187	-		SO3273	0.83	+1.8
3,414,187	-		SO3273	0.83	+1.0
3,414,187	-		SO3273	0.83	+2.1
3,414,187	-		SO3273	0.83	+1.9
3,414,187	-		SO3273	0.83	+1.8
3,414,187	-		SO3273	0.83	+1.4
3,414,187	-		SO3273	0.83	+1.8
3,414,187	-		SO3273	0.83	+1.5
3,414,187	-		SO3273	0.83	+1.9
3,414,187	-		SO3273	0.83	+1.9
3,414,202	+		SO3273	0.84	+1.3
3,414,210	-		SO3273	0.84	+1.8
3,414,210	-		SO3273	0.84	+1.7
3,414,211	-		SO3273	0.84	+1.8
3,414,214	+		SO3273	0.84	+1.9
3,414,221	-		SO3273	0.85	+2.5
3,414,242	-		SO3273	0.86	+0.8
3,414,305	+		SO3273	0.88	+1.3
3,414,305	+		SO3273	0.88	+1.1
3,414,305	+		SO3273	0.88	+1.6
3,414,305	+		SO3273	0.88	+1.5
3,414,305	+		SO3273	0.88	+1.7
3,414,313	-		SO3273	0.88	+1.7
3,414,313	-		SO3273	0.88	+1.9
3,414,313	-		SO3273	0.88	+1.0
3,414,337	+		SO3273	0.89	+2.4
3,414,365	+				+2.0
3,414,365	+				+2.1
3,414,365	+				+2.2
3,414,365	+				+0.9
3,414,365	+				-0.7
3,414,365	+				+2.0
3,414,365	+				+1.9
3,414,373	-				+1.4
3,414,373	-				+1.9
3,414,373	-				+2.4
3,414,373	-				+1.7
3,414,373	-				+1.9
3,414,373	-				+2.0
3,414,373	-				+1.9
3,414,373	-				+2.0
3,414,373	-				+2.3
3,414,373	-				+0.8
3,414,495	+				+0.9
3,414,519	+				+1.5
3,414,547	+				+0.8
3,414,555	-				-0.3
3,414,555	-				-0.3
3,414,555	-				+0.9
3,414,555	-				+0.1
3,414,565	+				+0.4
3,414,584	-				+1.0
3,414,584	-				+0.7
3,414,584	-				+2.1
3,414,656	-				+0.0
3,414,695	+				+0.3
3,414,713	+				-0.1
3,414,713	+				+0.1
3,414,713	+				-1.6
3,414,713	+				-0.0
3,414,713	+				-0.5
3,414,713	+				-0.6
3,414,713	+				-0.0
3,414,713	+				-0.3
3,414,721	+				-0.5
3,414,721	+				-0.6
3,414,721	-				+0.1
3,414,721	-				+0.7
3,414,721	-				-0.4
3,414,721	-				-1.2
3,414,721	-				+1.0
3,414,721	-				+0.9
3,414,721	-				+0.3
3,414,722	-				-0.2
3,414,722	-				-0.5
3,414,729	-				-0.1
3,414,729	-				-0.2
3,414,763	+		SO3274	0.12	-0.3
3,414,765	-		SO3274	0.13	-1.2
3,414,828	+		SO3274	0.26	-0.0
3,414,836	-		SO3274	0.28	+0.3
3,414,895	+		SO3274	0.40	-2.0
3,414,909	-		SO3274	0.43	+0.3
3,414,942	+		SO3274	0.50	-0.7
3,414,964	+		SO3274	0.54	-1.9
3,414,964	+		SO3274	0.54	-1.2
3,414,999	+		SO3274	0.62	-0.0
3,415,000	-		SO3274	0.62	-0.1
3,415,105	+		SO3274	0.84	-0.6
3,415,135	+				-0.6
3,415,139	+				+0.1
3,415,202	-				+0.5
3,415,202	-				+0.0
3,415,202	-				-0.4
3,415,421	-				-1.1
3,415,474	-				+0.0
3,415,527	-		SO3275	0.12	-0.9