Strain Fitness in Shewanella oneidensis MR-1 around SO3069

Experiment: Bacitracin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.5 mg/ml
3,184,771	-				-0.3
3,184,771	-				-1.2
3,184,771	-				-0.2
3,184,805	-		SO_3068	0.12	+0.3
3,184,888	-		SO_3068	0.23	-0.1
3,184,982	-		SO_3068	0.35	+0.6
3,185,164	+		SO_3068	0.58	-0.6
3,185,191	-		SO_3068	0.61	-0.7
3,185,204	-		SO_3068	0.63	+0.1
3,185,410	+		SO_3068	0.89	+0.4
3,185,426	+				+1.4
3,185,428	-				-1.3
3,185,432	+				-0.8
3,185,830	-				-0.3
3,185,840	+				-2.1
3,185,840	+				-0.3
3,185,842	-				-0.0
3,185,845	+				-0.9
3,185,967	+		SO3069	0.11	-0.5
3,186,003	-		SO3069	0.12	-1.5
3,186,142	+		SO3069	0.16	+1.0
3,186,302	+		SO3069	0.21	-0.8
3,186,302	+		SO3069	0.21	-1.3
3,186,476	+		SO3069	0.26	-1.8
3,186,477	-		SO3069	0.26	-3.3
3,186,590	-		SO3069	0.30	-3.3
3,186,597	-		SO3069	0.30	-0.8
3,186,628	-		SO3069	0.31	-2.3
3,186,649	+		SO3069	0.32	-2.1
3,186,656	+		SO3069	0.32	-1.2
3,186,656	+		SO3069	0.32	-1.7
3,186,656	+		SO3069	0.32	-0.9
3,186,656	+		SO3069	0.32	-2.4
3,186,656	+		SO3069	0.32	-0.5
3,186,659	-		SO3069	0.32	-0.5
3,186,664	-		SO3069	0.32	-2.2
3,186,664	-		SO3069	0.32	-1.2
3,186,664	-		SO3069	0.32	-1.3
3,186,668	+		SO3069	0.32	-2.1
3,186,668	+		SO3069	0.32	-0.1
3,186,670	+		SO3069	0.32	+0.0
3,186,724	-		SO3069	0.34	-1.7
3,186,820	-		SO3069	0.37	-0.6
3,186,903	-		SO3069	0.39	-0.5
3,186,935	-		SO3069	0.40	-0.6
3,186,990	+		SO3069	0.42	-1.9
3,186,998	-		SO3069	0.42	-1.0
3,187,158	+		SO3069	0.47	-3.4
3,187,305	+		SO3069	0.51	-0.2
3,187,321	-		SO3069	0.52	-2.1
3,187,323	-		SO3069	0.52	-1.1
3,187,387	+		SO3069	0.54	-1.4
3,187,395	-		SO3069	0.54	+2.5
3,187,495	+		SO3069	0.57	-1.0
3,187,530	+		SO3069	0.58	+0.4
3,187,538	-		SO3069	0.58	-0.0
3,187,549	-		SO3069	0.59	-1.0
3,187,612	+		SO3069	0.60	-1.1
3,187,636	-		SO3069	0.61	-0.5
3,187,636	-		SO3069	0.61	-1.8
3,187,640	+		SO3069	0.61	-0.3
3,187,741	-		SO3069	0.64	-0.8
3,187,881	-		SO3069	0.69	-0.9
3,188,235	-		SO3069	0.79	+0.8
3,188,497	-		SO3069	0.87	+0.5
3,188,627	-				+0.4
3,188,627	-				-1.5
3,188,627	-				+0.7
3,188,629	+				-0.7
3,188,659	-				-0.3
3,188,701	-				+0.2
3,189,092	+				-0.0