Strain Fitness in Shewanella oneidensis MR-1 around SO2538

Experiment: Bacitracin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.5 mg/ml
2,667,309	-		SO2537	0.66	-0.3
2,667,316	-		SO2537	0.67	+1.1
2,667,413	+		SO2537	0.72	-0.5
2,667,418	+		SO2537	0.72	+0.7
2,667,470	-		SO2537	0.74	-0.1
2,667,470	-		SO2537	0.74	+1.6
2,667,506	+		SO2537	0.76	+1.0
2,667,544	+		SO2537	0.78	-0.8
2,667,580	-		SO2537	0.80	-0.2
2,667,615	+		SO2537	0.82	+0.8
2,667,666	+		SO2537	0.84	-1.3
2,667,666	+		SO2537	0.84	-1.7
2,667,674	-		SO2537	0.85	+0.4
2,667,674	-		SO2537	0.85	-1.9
2,667,679	+		SO2537	0.85	+0.5
2,667,689	-		SO2537	0.85	-0.7
2,667,692	-		SO2537	0.86	-1.1
2,667,781	+		SO2537	0.90	+0.5
2,667,834	+				-0.6
2,667,855	+				-0.1
2,667,875	+				-0.7
2,667,908	+				+0.9
2,667,960	-				+0.6
2,667,960	-				+0.4
2,667,997	-				+0.3
2,668,118	-				-1.0
2,668,118	-				-0.5
2,668,204	+				+0.4
2,668,209	+				+0.7
2,668,254	+				-0.4
2,668,254	+				-1.1
2,668,259	+				+0.7
2,668,261	-				-0.9
2,668,262	-				-1.2
2,668,262	-				-0.2
2,668,262	-				+0.3
2,668,288	+				-0.4
2,668,288	+				-0.1
2,668,313	+				+0.0
2,668,365	+				-0.3
2,668,373	-				+0.3
2,668,374	-				+0.0
2,668,381	+				-0.1
2,668,406	+				-0.7
2,668,406	+				+0.6
2,668,406	+				+0.3
2,668,406	+				-0.0
2,668,406	+				-0.4
2,668,406	+				+0.5
2,668,414	+				-2.3
2,668,414	-				-0.5
2,668,414	-				-0.4
2,668,414	-				+0.1
2,668,414	-				+0.3
2,668,420	+		SO2538	0.10	-0.1
2,668,421	+		SO2538	0.11	+0.4
2,668,421	+		SO2538	0.11	-0.9
2,668,421	+		SO2538	0.11	-0.2
2,668,421	+		SO2538	0.11	+1.2
2,668,429	+		SO2538	0.11	-0.1
2,668,429	-		SO2538	0.11	+0.1
2,668,429	-		SO2538	0.11	+0.5
2,668,429	-		SO2538	0.11	+1.3
2,668,444	-		SO2538	0.13	-0.0
2,668,447	+		SO2538	0.13	+0.6
2,668,449	-		SO2538	0.13	+0.0
2,668,457	+		SO2538	0.14	+0.2
2,668,565	+		SO2538	0.23	+0.6
2,668,624	-		SO2538	0.29	+0.8
2,668,631	+		SO2538	0.29	+0.6
2,668,719	+		SO2538	0.37	-0.5
2,668,727	-		SO2538	0.38	-0.2
2,668,762	+		SO2538	0.41	-1.3
2,668,793	+		SO2538	0.44	+0.7
2,668,799	+		SO2538	0.44	-0.7
2,668,801	-		SO2538	0.45	+0.6
2,668,801	-		SO2538	0.45	+0.5
2,668,807	-		SO2538	0.45	-0.6
2,669,069	+		SO2538	0.69	-0.7
2,669,077	-		SO2538	0.69	+0.6
2,669,127	+		SO2538	0.74	+0.9
2,669,221	+		SO2538	0.82	+0.4
2,669,330	-				-0.5
2,669,330	-				+0.4
2,669,370	+				+0.4
2,669,528	+				+0.2
2,669,528	+				-0.1
2,669,536	-				-0.9
2,669,602	+				+0.8
2,669,714	+		SO2539	0.15	+0.9
2,669,723	+		SO2539	0.15	-0.7
2,669,723	+		SO2539	0.15	+0.1
2,669,732	-		SO2539	0.15	-1.2
2,669,756	+		SO2539	0.17	-0.7
2,669,793	-		SO2539	0.19	+0.2
2,669,862	+		SO2539	0.22	-0.1
2,669,909	+		SO2539	0.24	-0.2
2,670,004	+		SO2539	0.29	-1.4
2,670,106	-		SO2539	0.34	+0.2
2,670,106	-		SO2539	0.34	+0.0
2,670,106	-		SO2539	0.34	-0.0
2,670,164	+		SO2539	0.37	+2.1
2,670,181	-		SO2539	0.38	-0.0
2,670,265	-		SO2539	0.42	-0.5
2,670,270	-		SO2539	0.43	+0.4
2,670,277	-		SO2539	0.43	-0.4
2,670,305	+		SO2539	0.44	-0.2
2,670,346	+		SO2539	0.47	+0.1
2,670,346	+		SO2539	0.47	+1.4
2,670,354	-		SO2539	0.47	+0.2
2,670,360	+		SO2539	0.47	-0.4
2,670,368	-		SO2539	0.48	+0.1
2,670,389	+		SO2539	0.49	-0.6